BO30594.complete Sequence
298 bp assembled on 2011-09-30
GenBank Submission: KX793783
> BO30594.complete
GAAGTTATCAGTCGACATGTCTCCTAAGTTCGCACTTGCAGTTCTGCTCC
TCAGCTGCGTTCTCCTAGGACTGGCCAATGCCCAGTATAACAGGCGCTAT
CAGACTGGGCCTAACCGACAAAAAATTGGGACTCGAATGAATGCGGACGG
CCCTTTGCCGCCAAATTTCCCCCCTCCGGCTGATAATGCTGGTGGCAGTG
ATGTCCCGGCCAACGTGGATTGCATGCCCAATCTATTGGCTAGTAACACC
CTTGATACCAGGAAACCTAGGCCCAAGCATGCAAGCTTTCTAGACCAT
BO30594.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:50:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42792-RA | 267 | CG42792-PA | 1..264 | 17..280 | 1320 | 100 | Plus |
| CG42792-RB | 267 | CG42792-PB | 1..264 | 17..280 | 1320 | 100 | Plus |
| CG44475-RA | 246 | CG44475-PA | 1..243 | 17..280 | 760 | 86.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:50:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42792-RA | 397 | CG42792-RA | 7..270 | 17..280 | 1320 | 100 | Plus |
| CG42792-RB | 468 | CG42792-RB | 39..302 | 17..280 | 1320 | 100 | Plus |
| CG44475-RA | 343 | CG44475-RA | 18..260 | 17..280 | 760 | 86.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:50:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15865095..15865250 | 280..125 | 780 | 100 | Minus |
| 2L | 23513712 | 2L | 15865316..15865423 | 124..17 | 540 | 100 | Minus |
| 2L | 23513712 | 2L | 15882866..15882974 | 280..172 | 440 | 93.6 | Minus |
| 2L | 23513712 | 2L | 15883066..15883173 | 124..17 | 435 | 93.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 12:50:06 has no hits.
BO30594.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:18 Download gff for
BO30594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42792-RA | 1..264 | 17..282 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:38:01 Download gff for
BO30594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42792-RA | 7..270 | 17..282 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:05:44 Download gff for
BO30594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42792-RB | 39..302 | 17..282 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:05:44 Download gff for
BO30594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15865316..15865423 | 17..124 | 100 | | Minus |
| 2L | 15865093..15865250 | 125..282 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:38:01 Download gff for
BO30594.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15865093..15865250 | 125..282 | 98 | <- | Minus |
| arm_2L | 15865316..15865423 | 17..124 | 100 | | Minus |
BO30594.pep Sequence
Translation from 16 to 298
> BO30594.pep
MSPKFALAVLLLSCVLLGLANAQYNRRYQTGPNRQKIGTRMNADGPLPPN
FPPPADNAGGSDVPANVDCMPNLLASNTLDTRKPRPKHASFLDH
BO30594.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:25:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42792-PA | 88 | CG42792-PA | 1..88 | 1..88 | 472 | 100 | Plus |
| CG42792-PB | 88 | CG42792-PB | 1..88 | 1..88 | 472 | 100 | Plus |
| CG44475-PA | 81 | CG44475-PA | 1..81 | 1..88 | 382 | 85.2 | Plus |
