BO30636.complete Sequence
1012 bp assembled on 2011-09-30
GenBank Submission: KX798474
> BO30636.complete
GAAGTTATCAGTCGACATGGAAAATTCTGCGCGAATCGTATATGTGTGCA
GTCTCTGCCTTCGTCAATATGATCTCCAGGAGGATCTTCGAGGACATCTC
GTCTACTTTCACGGCTATGAGCCCATCTCAACGCCCAGTGTCAAAAACAA
AACTGCGAAGACTTCAACTAAGGAACAAACTGCAGCCGGCAGCAACAGCC
AGGATAAGCAAACCGTTGTGGAGCGATCGGAGAACTCGGAACCCCCGGCA
AGTGAACTGCAGCCCATGCCTTTCAAGGACTTTCGGCTGGTGCTAAGGGC
CAACATGTTAGAGCCGTGCTCCTTTGGAAAGGAATGCCCCTTCAAGTTCC
AAGATGCTACCAAAATGGAGCTCCACTGTAGTTGCCATAAGGGTGGCAGT
TTTTCCTGCTGCGAATGTGGCATGGAACTGCCCAACTGGCGGCGGTGCTC
GGCTCACCTGTGGAAAGCCCACCAGGTGGATGTGGACCTACTAGTGTGTC
CCGTTTTCGAATGCAACTACAAGTCGCCCATATCCGCTCTCGTGTGGCGC
CACATGCAGGTTCACAAAAAGTGGCGACCCAGGGTGCTCCGGTCACTGGC
TGCCGTTCAGCGGAGAAGAAAGCTCAAGGAACAGTCCGCAGAGATGGCCG
CGCAACCTGCTGCTCTGCCACCATCGTCAAAGAAAAACAAATACTATGCC
GAGAAGACTTGCGAGATTTGCAATCGCAAGTTTGTCAACGGTAAAACGCT
CTCTAAACACGTGAAGACTGTTCACAACAAAATCAAGCCATTTATCTGCA
ATGTGTGTGGCAAAAAGACGGCTCGCAAGGCTAGCTTAATAGTGAGTTCA
GATAGCACTTTACGATCTTCTTGCTACCTAATACTCTTTCCAGATTCACA
TGCGTCAGCACACGGGCGAGAAGCCGCTGCAATGTGGCGAATGCAAGTTC
TCCACTCGCGATCCCAGTGTCCTGCACAAGCATCGGCAGCGTCAGCAAGC
TTTCTAGACCAT
BO30636.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:18:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11456-RB | 981 | CG11456-PB | 1..978 | 17..994 | 4890 | 100 | Plus |
| CG11456-RC | 1338 | CG11456-PC | 1..825 | 17..841 | 4125 | 100 | Plus |
| CG11456-RA | 1338 | CG11456-PA | 1..825 | 17..841 | 4125 | 100 | Plus |
| CG11456-RC | 1338 | CG11456-PC | 826..926 | 894..994 | 505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:18:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11456-RB | 1806 | CG11456-RB | 65..1042 | 17..994 | 4890 | 100 | Plus |
| CG11456-RC | 1433 | CG11456-RC | 65..889 | 17..841 | 4125 | 100 | Plus |
| CG11456-RA | 1754 | CG11456-RA | 65..889 | 17..841 | 4125 | 100 | Plus |
| CG11456-RC | 1433 | CG11456-RC | 890..990 | 894..994 | 505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:18:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20842403..20843081 | 316..994 | 3395 | 100 | Plus |
| 3L | 28110227 | 3L | 20842051..20842351 | 17..317 | 1505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:18:35 has no hits.
BO30636.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:53:20 Download gff for
BO30636.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11456-RB | 51..1028 | 17..996 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:26:19 Download gff for
BO30636.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11456-RB | 65..1042 | 17..996 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:15:30 Download gff for
BO30636.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11456-RB | 65..1042 | 17..996 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:15:30 Download gff for
BO30636.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20842051..20842349 | 17..315 | 100 | -> | Plus |
| 3L | 20842403..20843081 | 316..996 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:26:19 Download gff for
BO30636.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20835151..20835449 | 17..315 | 100 | -> | Plus |
| arm_3L | 20835503..20836181 | 316..996 | 99 | | Plus |
BO30636.pep Sequence
Translation from 16 to 1012
> BO30636.pep
MENSARIVYVCSLCLRQYDLQEDLRGHLVYFHGYEPISTPSVKNKTAKTS
TKEQTAAGSNSQDKQTVVERSENSEPPASELQPMPFKDFRLVLRANMLEP
CSFGKECPFKFQDATKMELHCSCHKGGSFSCCECGMELPNWRRCSAHLWK
AHQVDVDLLVCPVFECNYKSPISALVWRHMQVHKKWRPRVLRSLAAVQRR
RKLKEQSAEMAAQPAALPPSSKKNKYYAEKTCEICNRKFVNGKTLSKHVK
TVHNKIKPFICNVCGKKTARKASLIVSSDSTLRSSCYLILFPDSHASAHG
REAAAMWRMQVLHSRSQCPAQASAASASFLDH
BO30636.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:26:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11456-PB | 326 | CG11456-PB | 1..326 | 1..326 | 1748 | 100 | Plus |
| CG11456-PC | 445 | CG11456-PC | 1..276 | 1..276 | 1490 | 99.6 | Plus |
| CG11456-PA | 445 | CG11456-PA | 1..276 | 1..276 | 1490 | 99.6 | Plus |
