Clone BO30676 Report

Search the DGRC for BO30676

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:306
Well:76
Vector:pDNR-Dual
Associated Gene/TranscriptCG11023-RB
Protein status:BO30676.pep: Imported from assembly
Sequenced Size:886

Clone Sequence Records

BO30676.complete Sequence

886 bp assembled on 2011-09-30

GenBank Submission: KX795172

> BO30676.complete
GAAGTTATCAGTCGACATGGGCGAGCGGGATCAGCCACAGAGCTCAGAGC
GGATCTCAATATTTAATCCGCCAGTATACACGCAGCACCAGGTGCGCAAT
GAAGCCCCCTACATACCCACCACATTTGACCTCCTCTCAGACGATGAGGA
GTCGTCACAGAGAGTTGCCAACGCCGGGCCATCTTTCAGGCCCTTGACTT
ACTCGGATGCTGTGCGTCTAAGCCAGAATGGCTTCGCCAACTCCCGCGTA
AGTGGGCACTCCAGCTATACGGTGCGCAGACCACCGGCACTAGTTGACAG
AAGCATTCTATCCCAGGAAATGGAGCGCATGGACCAAGAGCAGTATATCT
ACCTTATCCGTACCGCAGCCCAAAGTAATTCCGTGGGCAGTCACTACGCC
GAACCGGTTACTGATAACTCGGAGGTCAAGAAAGTCAGTGAAACCAACAA
AAGTGACGCACCACAGCCGTTAACCCCTCAACCTACCAGACTCACCAGAA
CAGAATCCTTGCACCGTCGTTTTGCCAGCTGCGTCAACTTAAATGATGAC
TTCGCCGAGCAATTTAAAGCAAGAGCGGCGGACTGTGAAGAGAAATCCAA
ACATCGTCTTAGATTAGCTGAAGAGCAGAGGCTTTTTTCGAATTTCAGTG
CTATAAAGAACATAGATGAACTCCGTGCCTATGAACGAAAAGTAGTGGAA
AACATATTCCAGTCTTGTATCGCCCACAAGCCCATTTTTGTACTCGGGCC
CTTGGACAAGCCAAATGTGAAGAAAGTGACCAAGCTCATTCCGTTAACAG
AGGAGCACCACGATCGCTTTAACGAAATTACACAGGATGATAAATCGACG
GTATGGCAACGAATATATGCAAGCTTTCTAGACCAT

BO30676.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:21:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11023-RB 855 CG11023-PB 1..852 17..868 4260 100 Plus
CG11023-RC 1443 CG11023-PC 1..835 17..851 4175 100 Plus
CG11023-RD 819 CG11023-PD 1..437 17..453 2185 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:21:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11023-RB 1880 CG11023-RB 151..1003 16..868 4265 100 Plus
CG11023-RC 1802 CG11023-RC 151..986 16..851 4180 100 Plus
CG11023-RD 1844 CG11023-RD 151..588 16..453 2190 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:21:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7679..8116 16..453 2190 100 Plus
2L 23513712 2L 8191..8607 452..868 2085 100 Plus
X 23542271 X 19204495..19204830 364..17 760 81.9 Minus
X 23542271 X 19203584..19203789 832..627 325 77.2 Minus
Blast to na_te.dros performed on 2014-11-27 13:21:02 has no hits.

BO30676.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:53:22 Download gff for BO30676.complete
Subject Subject Range Query Range Percent Splice Strand
CG11023-RB 152..1003 17..870 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:33:50 Download gff for BO30676.complete
Subject Subject Range Query Range Percent Splice Strand
CG11023-RB 152..1003 17..870 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:16:25 Download gff for BO30676.complete
Subject Subject Range Query Range Percent Splice Strand
CG11023-RB 152..1003 17..870 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:16:25 Download gff for BO30676.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7680..8116 17..453 100 -> Plus
2L 8193..8607 454..870 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:33:50 Download gff for BO30676.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7680..8116 17..453 100 -> Plus
arm_2L 8193..8607 454..870 99   Plus

BO30676.pep Sequence

Translation from 16 to 886

> BO30676.pep
MGERDQPQSSERISIFNPPVYTQHQVRNEAPYIPTTFDLLSDDEESSQRV
ANAGPSFRPLTYSDAVRLSQNGFANSRVSGHSSYTVRRPPALVDRSILSQ
EMERMDQEQYIYLIRTAAQSNSVGSHYAEPVTDNSEVKKVSETNKSDAPQ
PLTPQPTRLTRTESLHRRFASCVNLNDDFAEQFKARAADCEEKSKHRLRL
AEEQRLFSNFSAIKNIDELRAYERKVVENIFQSCIAHKPIFVLGPLDKPN
VKKVTKLIPLTEEHHDRFNEITQDDKSTVWQRIYASFLDH

BO30676.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:26:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG11023-PB 284 CG11023-PB 1..284 1..284 1468 100 Plus
CG11023-PC 480 CG11023-PC 1..278 1..278 1432 100 Plus
CG11023-PD 272 CG11023-PD 1..272 1..284 1379 95.8 Plus
Ulp1-PA 1513 CG12359-PA 932..1057 1..132 442 68.2 Plus
Ulp1-PA 1513 CG12359-PA 1169..1309 128..278 312 45 Plus