BO30676.complete Sequence
886 bp assembled on 2011-09-30
GenBank Submission: KX795172
> BO30676.complete
GAAGTTATCAGTCGACATGGGCGAGCGGGATCAGCCACAGAGCTCAGAGC
GGATCTCAATATTTAATCCGCCAGTATACACGCAGCACCAGGTGCGCAAT
GAAGCCCCCTACATACCCACCACATTTGACCTCCTCTCAGACGATGAGGA
GTCGTCACAGAGAGTTGCCAACGCCGGGCCATCTTTCAGGCCCTTGACTT
ACTCGGATGCTGTGCGTCTAAGCCAGAATGGCTTCGCCAACTCCCGCGTA
AGTGGGCACTCCAGCTATACGGTGCGCAGACCACCGGCACTAGTTGACAG
AAGCATTCTATCCCAGGAAATGGAGCGCATGGACCAAGAGCAGTATATCT
ACCTTATCCGTACCGCAGCCCAAAGTAATTCCGTGGGCAGTCACTACGCC
GAACCGGTTACTGATAACTCGGAGGTCAAGAAAGTCAGTGAAACCAACAA
AAGTGACGCACCACAGCCGTTAACCCCTCAACCTACCAGACTCACCAGAA
CAGAATCCTTGCACCGTCGTTTTGCCAGCTGCGTCAACTTAAATGATGAC
TTCGCCGAGCAATTTAAAGCAAGAGCGGCGGACTGTGAAGAGAAATCCAA
ACATCGTCTTAGATTAGCTGAAGAGCAGAGGCTTTTTTCGAATTTCAGTG
CTATAAAGAACATAGATGAACTCCGTGCCTATGAACGAAAAGTAGTGGAA
AACATATTCCAGTCTTGTATCGCCCACAAGCCCATTTTTGTACTCGGGCC
CTTGGACAAGCCAAATGTGAAGAAAGTGACCAAGCTCATTCCGTTAACAG
AGGAGCACCACGATCGCTTTAACGAAATTACACAGGATGATAAATCGACG
GTATGGCAACGAATATATGCAAGCTTTCTAGACCAT
BO30676.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:21:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11023-RB | 855 | CG11023-PB | 1..852 | 17..868 | 4260 | 100 | Plus |
CG11023-RC | 1443 | CG11023-PC | 1..835 | 17..851 | 4175 | 100 | Plus |
CG11023-RD | 819 | CG11023-PD | 1..437 | 17..453 | 2185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:21:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11023-RB | 1880 | CG11023-RB | 151..1003 | 16..868 | 4265 | 100 | Plus |
CG11023-RC | 1802 | CG11023-RC | 151..986 | 16..851 | 4180 | 100 | Plus |
CG11023-RD | 1844 | CG11023-RD | 151..588 | 16..453 | 2190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:21:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7679..8116 | 16..453 | 2190 | 100 | Plus |
2L | 23513712 | 2L | 8191..8607 | 452..868 | 2085 | 100 | Plus |
X | 23542271 | X | 19204495..19204830 | 364..17 | 760 | 81.9 | Minus |
X | 23542271 | X | 19203584..19203789 | 832..627 | 325 | 77.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:21:02 has no hits.
BO30676.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:53:22 Download gff for
BO30676.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11023-RB | 152..1003 | 17..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:33:50 Download gff for
BO30676.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11023-RB | 152..1003 | 17..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:16:25 Download gff for
BO30676.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11023-RB | 152..1003 | 17..870 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:16:25 Download gff for
BO30676.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7680..8116 | 17..453 | 100 | -> | Plus |
2L | 8193..8607 | 454..870 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:33:50 Download gff for
BO30676.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7680..8116 | 17..453 | 100 | -> | Plus |
arm_2L | 8193..8607 | 454..870 | 99 | | Plus |
BO30676.pep Sequence
Translation from 16 to 886
> BO30676.pep
MGERDQPQSSERISIFNPPVYTQHQVRNEAPYIPTTFDLLSDDEESSQRV
ANAGPSFRPLTYSDAVRLSQNGFANSRVSGHSSYTVRRPPALVDRSILSQ
EMERMDQEQYIYLIRTAAQSNSVGSHYAEPVTDNSEVKKVSETNKSDAPQ
PLTPQPTRLTRTESLHRRFASCVNLNDDFAEQFKARAADCEEKSKHRLRL
AEEQRLFSNFSAIKNIDELRAYERKVVENIFQSCIAHKPIFVLGPLDKPN
VKKVTKLIPLTEEHHDRFNEITQDDKSTVWQRIYASFLDH
BO30676.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:26:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11023-PB | 284 | CG11023-PB | 1..284 | 1..284 | 1468 | 100 | Plus |
CG11023-PC | 480 | CG11023-PC | 1..278 | 1..278 | 1432 | 100 | Plus |
CG11023-PD | 272 | CG11023-PD | 1..272 | 1..284 | 1379 | 95.8 | Plus |
Ulp1-PA | 1513 | CG12359-PA | 932..1057 | 1..132 | 442 | 68.2 | Plus |
Ulp1-PA | 1513 | CG12359-PA | 1169..1309 | 128..278 | 312 | 45 | Plus |