Clone BO30707 Report

Search the DGRC for BO30707

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:307
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG9067-RA
Protein status:BO30707.pep: Imported from assembly
Sequenced Size:451

Clone Sequence Records

BO30707.complete Sequence

451 bp assembled on 2012-03-05

> BO30707.complete
GAAGTTATCAGTCGACATGGCATTTTGCATAGCAGTTATTGGCAAGGATA
ACGCCCCCCTGTACCTGACCACATCCGATATGGAGCAGGAACTGGAATTG
CAATATCATGTTAACGCCGCCTTAGACGTCGTGGAGGAGAAGTGCCTGAT
TGGCAAGGGTGCTCCGGAGTCCAAGGAGCTGTACCTGGGACTGCTCTACT
CGACAGAGAACCACAAAATATACGGCTTTGTGACCAACACTCGGGTGAAA
TTCATAGTGGTCATCGACTCCAGCAACGTTGCCCTTCGGGAAAACGAAGT
TCGAGCAATCTTCCGAAATCTCCACTTGCTCTACACCGATGCCATCTGCA
ATCCCTTTTACATTCCCGGCGAATCGCTGACTTCAAAGAAGTTCGATCGC
GCTGTCCAGAAACTGATGAGCGGCACTGCCGCAAGCTTTCTAGACCATTC
A

BO30707.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:06:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG9067-RA 417 CG9067-PA 1..414 17..430 2070 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:06:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG9067-RA 548 CG9067-RA 89..502 17..430 2070 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:05:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11279335..11279508 223..50 855 99.4 Minus
2R 25286936 2R 11279191..11279278 307..220 440 100 Minus
2R 25286936 2R 11279045..11279125 388..308 405 100 Minus
2R 25286936 2R 11278939..11278981 430..388 215 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:06:00 has no hits.

BO30707.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:49 Download gff for BO30707.complete
Subject Subject Range Query Range Percent Splice Strand
CG9067-RA 7..420 17..432 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:31 Download gff for BO30707.complete
Subject Subject Range Query Range Percent Splice Strand
CG9067-RA 89..502 17..432 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:10:54 Download gff for BO30707.complete
Subject Subject Range Query Range Percent Splice Strand
CG9067-RA 89..502 17..432 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:10:54 Download gff for BO30707.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11278935..11278981 388..432 95 <- Minus
2R 11279046..11279125 308..387 100 <- Minus
2R 11279191..11279278 220..307 100 <- Minus
2R 11279339..11279508 50..219 100 <- Minus
2R 11279563..11279595 17..49 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:31 Download gff for BO30707.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7166844..7167013 50..219 100 <- Minus
arm_2R 7167068..7167100 17..49 100   Minus
arm_2R 7166440..7166486 388..432 95 <- Minus
arm_2R 7166551..7166630 308..387 100 <- Minus
arm_2R 7166696..7166783 220..307 100 <- Minus

BO30707.pep Sequence

Translation from 16 to 451

> BO30707.pep
MAFCIAVIGKDNAPLYLTTSDMEQELELQYHVNAALDVVEEKCLIGKGAP
ESKELYLGLLYSTENHKIYGFVTNTRVKFIVVIDSSNVALRENEVRAIFR
NLHLLYTDAICNPFYIPGESLTSKKFDRAVQKLMSGTAASFLDHS

BO30707.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG9067-PA 138 CG9067-PA 1..138 1..138 705 100 Plus