BO30707.complete Sequence
451 bp assembled on 2012-03-05
> BO30707.complete
GAAGTTATCAGTCGACATGGCATTTTGCATAGCAGTTATTGGCAAGGATA
ACGCCCCCCTGTACCTGACCACATCCGATATGGAGCAGGAACTGGAATTG
CAATATCATGTTAACGCCGCCTTAGACGTCGTGGAGGAGAAGTGCCTGAT
TGGCAAGGGTGCTCCGGAGTCCAAGGAGCTGTACCTGGGACTGCTCTACT
CGACAGAGAACCACAAAATATACGGCTTTGTGACCAACACTCGGGTGAAA
TTCATAGTGGTCATCGACTCCAGCAACGTTGCCCTTCGGGAAAACGAAGT
TCGAGCAATCTTCCGAAATCTCCACTTGCTCTACACCGATGCCATCTGCA
ATCCCTTTTACATTCCCGGCGAATCGCTGACTTCAAAGAAGTTCGATCGC
GCTGTCCAGAAACTGATGAGCGGCACTGCCGCAAGCTTTCTAGACCATTC
A
BO30707.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:06:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9067-RA | 417 | CG9067-PA | 1..414 | 17..430 | 2070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:06:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9067-RA | 548 | CG9067-RA | 89..502 | 17..430 | 2070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:05:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11279335..11279508 | 223..50 | 855 | 99.4 | Minus |
2R | 25286936 | 2R | 11279191..11279278 | 307..220 | 440 | 100 | Minus |
2R | 25286936 | 2R | 11279045..11279125 | 388..308 | 405 | 100 | Minus |
2R | 25286936 | 2R | 11278939..11278981 | 430..388 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:06:00 has no hits.
BO30707.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:49 Download gff for
BO30707.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9067-RA | 7..420 | 17..432 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:31 Download gff for
BO30707.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9067-RA | 89..502 | 17..432 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:10:54 Download gff for
BO30707.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9067-RA | 89..502 | 17..432 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:10:54 Download gff for
BO30707.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11278935..11278981 | 388..432 | 95 | <- | Minus |
2R | 11279046..11279125 | 308..387 | 100 | <- | Minus |
2R | 11279191..11279278 | 220..307 | 100 | <- | Minus |
2R | 11279339..11279508 | 50..219 | 100 | <- | Minus |
2R | 11279563..11279595 | 17..49 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:31 Download gff for
BO30707.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7166844..7167013 | 50..219 | 100 | <- | Minus |
arm_2R | 7167068..7167100 | 17..49 | 100 | | Minus |
arm_2R | 7166440..7166486 | 388..432 | 95 | <- | Minus |
arm_2R | 7166551..7166630 | 308..387 | 100 | <- | Minus |
arm_2R | 7166696..7166783 | 220..307 | 100 | <- | Minus |
BO30707.pep Sequence
Translation from 16 to 451
> BO30707.pep
MAFCIAVIGKDNAPLYLTTSDMEQELELQYHVNAALDVVEEKCLIGKGAP
ESKELYLGLLYSTENHKIYGFVTNTRVKFIVVIDSSNVALRENEVRAIFR
NLHLLYTDAICNPFYIPGESLTSKKFDRAVQKLMSGTAASFLDHS
BO30707.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9067-PA | 138 | CG9067-PA | 1..138 | 1..138 | 705 | 100 | Plus |