BO30709.complete Sequence
1999 bp assembled on 2012-04-30
GenBank Submission: KX797857
> BO30709.complete
GAAGTTATCAGTCGACATGTGGTTGATTGCCTGCCTGTTTATTGTTCCTA
TTTGCGCTGCTCCAACAACCCAGAATGTCGAGGCGGATCCCAATTCACGG
CTAATGAACAACATCCTCAGCTACGTGGCGGAGGATTCCAGTGCGTGCGG
CACCTACTTTCAATATGCCTGCGGCAAGTACGCAGTACGTCACCGCGACG
ATCCCTTCACGGAGATCATCCAGATGCTGGACCACAAGGTGAACGGAAAC
CTAGTCCAACTGATGCACGAGCTGCACCAGCGCTCCCAGTCACCCGGCTT
CAACGAGTCCAGTGTGGAGGCCAAGGTCTTGCACTTCTACCGCACCTGCC
GTGAAGCTCCGCCGAGTACACGCAAGATGGAGCACTACCTTAGACTAGCC
CCTCCTGGCCAGGCACTTACATGGCCCCAGTTTATGCCCCGCGGCGAGCC
ATGGCCAAAGGCTCAATTCAAGTGGATGAAGTCCTTGGGACACCTATACC
GCTATGGGTTTACCAATGTTTTGGTGAACGTGTTGGTCTTACGGAGCTCT
GAGAACAGTAACCGCTTCCGACTGGACATCAGTATGCCTAGTCTCGAAGG
GGACGCGCAGCACCTGGGCGGTTTTCTAAGTACCCTCGCCACTCTCCAGA
TCATTGGTGTGCCGACGAAAAGCATATTACCCCTTGTGCGGAAGATCAGA
AGGCTAGAGTCCGCCATACGCGTCCTAACCGAAGTGGACGACGATGATGA
AAGCGAGACTTGGACTTTGCGCCAGTGGGAGTACAAAACCGGCTACGCAT
GGCAGGGTTTCGTCGAGTCAATAGTTGGCCATAGTGTCTCACATCACTAC
GTGATGCAGGCGCAGAATGCAAAGTACTTCACGGGCCTTAAGCGGCTGAT
GGACTCCACGGACGCCGAGGTGGTGGCCAACTACATCATGACCCGATTCG
TGCTCTACCTCATAGACGACTTTATTGACAGCAATGAGCACATTGATTGC
GTCACGGATATGCGCCGCAACATGAATCTGGCATCGAACCTGCTCTACAA
GGAGCGCTTCCTGGACCCTGCGACACTACAGCAGTACACCCAGGAAGTTA
CGAAGGTCTTTGAACAGCTGCGCCGGCAGTTTCTACTGCAAATCAATGAG
AATCGCCTTGGGCTAACCAGTGAGCAGAACAGTATGGTTGCCACAAAAGC
TCAGCATGTCGTTCTCAATATTGGGAATTTGCCAAGAGGTCGTGACCATC
GTAGCTTTGTCAGCCGGCACTATGAGGATCTTGTCTTTCCGCTCCCTGAT
TTCGACTACGCACGTGAACATCTTAACCTGCTGGAGTTCCGCACCAGAAA
GCAGGTTTTACAACTTAACCAAAGTGCTCCGACACCCGATGAGTTCTTCT
ACTTGTCGGATCCTAAAACGGCCATGAGCTCCGGACCCTACTACCTAATG
CGACTAAACATCATCGTTGTGCCACACGGACTTCTACAGGAGCCATTCTT
TGCAGCGGATAGCCACGACATATTCAAGTACAGCCTGTTGGGATTCGTAC
TTGCCCATGAGTTGATGCACTCAGTCGACACCGTGGGTCTTTATTATGAC
AGATATGGGAACATACACGAAATCGGACCGCAGATATCCAGTTCGCCACG
CTTTGTGGCGGGTTTACAGTGCCTGAACCGGAACAGTACACAGTATCTGG
ACGAGCGTATTGCAGACATTGCTGGACTGGATCTGGCCTATTCCACCTAC
TTCCAGAACAGCTCGCAAATGAGTCTAACCGATTTTACGACCATTCCGCC
GCAACAAATCTTCTTCCTCAATCTGGCACAGTTCTTCTGCGGCGATGGTG
ATCCAATAAACTTCGTTGGTCACGACAACGACGAGACGCGTCTGCAGCAA
ATGCTCAATGGGTTCGCGCCGTTTCACGAAGCTTTTGGTTGTCCAGCAAA
GAGCAATCAGCCTGAAAAGTGCCAACTGTGGGCAAGCTTTCTAGACCAT
BO30709.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:32:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42370-RA | 1968 | CG42370-PA | 1..1965 | 17..1981 | 9825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:32:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42370-RA | 2078 | CG9508-RA | 1..1965 | 17..1981 | 9825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:32:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6383548..6385512 | 1981..17 | 9825 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:32:07 has no hits.
BO30709.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-30 10:04:07 Download gff for
BO30709.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42370-RA | 1..1965 | 17..1983 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:33 Download gff for
BO30709.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42370-RA | 1..1965 | 17..1983 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:06:18 Download gff for
BO30709.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42370-RA | 1..1965 | 17..1983 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:06:18 Download gff for
BO30709.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6383546..6385512 | 17..1983 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:33 Download gff for
BO30709.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6383546..6385512 | 17..1983 | 99 | | Minus |
BO30709.pep Sequence
Translation from 16 to 1999
> BO30709.pep
MWLIACLFIVPICAAPTTQNVEADPNSRLMNNILSYVAEDSSACGTYFQY
ACGKYAVRHRDDPFTEIIQMLDHKVNGNLVQLMHELHQRSQSPGFNESSV
EAKVLHFYRTCREAPPSTRKMEHYLRLAPPGQALTWPQFMPRGEPWPKAQ
FKWMKSLGHLYRYGFTNVLVNVLVLRSSENSNRFRLDISMPSLEGDAQHL
GGFLSTLATLQIIGVPTKSILPLVRKIRRLESAIRVLTEVDDDDESETWT
LRQWEYKTGYAWQGFVESIVGHSVSHHYVMQAQNAKYFTGLKRLMDSTDA
EVVANYIMTRFVLYLIDDFIDSNEHIDCVTDMRRNMNLASNLLYKERFLD
PATLQQYTQEVTKVFEQLRRQFLLQINENRLGLTSEQNSMVATKAQHVVL
NIGNLPRGRDHRSFVSRHYEDLVFPLPDFDYAREHLNLLEFRTRKQVLQL
NQSAPTPDEFFYLSDPKTAMSSGPYYLMRLNIIVVPHGLLQEPFFAADSH
DIFKYSLLGFVLAHELMHSVDTVGLYYDRYGNIHEIGPQISSSPRFVAGL
QCLNRNSTQYLDERIADIAGLDLAYSTYFQNSSQMSLTDFTTIPPQQIFF
LNLAQFFCGDGDPINFVGHDNDETRLQQMLNGFAPFHEAFGCPAKSNQPE
KCQLWASFLDH
BO30709.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:25:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42370-PA | 655 | CG9508-PA | 1..655 | 1..655 | 3472 | 100 | Plus |
| CG4580-PA | 619 | CG4580-PA | 1..619 | 1..654 | 1368 | 41.7 | Plus |
| CG9507-PA | 684 | CG9507-PA | 9..684 | 2..655 | 633 | 27.3 | Plus |
| CG31918-PA | 629 | CG31918-PA | 24..601 | 23..615 | 567 | 28.5 | Plus |
| CG8550-PA | 633 | CG8550-PA | 1..619 | 4..655 | 433 | 24.3 | Plus |
