BO30712.complete Sequence
395 bp assembled on 2012-03-05
GenBank Submission: KX795857
> BO30712.complete
GAAGTTATCAGTTCGACATGATCAGAGTTACTACGTGCCTGTTGATGTTC
GTATTCTTTGTTTTGTACATCCATCAAAATCATGCCGACACCAAAGTGCT
TTACGAATTTCACATCAGGGAAGCCAACCAGCAGCGCGATGAAATGGGAG
AGTTCAAGGATACGTCCGAGGAATCTGACGAGGAACCCGAACTGATCATC
ACGGGCAAACGAACCTCTTCGTACGTTTTTCCCGCCAAGGATAACAACTA
TGTGTACGTGGAAACGGCCACCTATGTGGCGGATAACAATGGCTATCATG
TCAAGTACAACATCACCTTGGATACCGTGGAGCTTGACCGTCGCCTCAGC
GGACAAGCACTTAAGACCACCGCTGGTGCAAGCTTTCTAGACCAT
BO30712.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:04:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13841-RB | 363 | CG13841-PB | 1..360 | 18..377 | 1800 | 100 | Plus |
CG13841-RA | 363 | CG13841-PA | 1..360 | 18..377 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:04:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13841-RB | 541 | CG13841-RB | 35..394 | 18..377 | 1800 | 100 | Plus |
CG13841-RA | 835 | CG13841-RA | 35..394 | 18..377 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:04:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22767173..22767437 | 377..113 | 1325 | 100 | Minus |
3R | 32079331 | 3R | 22767505..22767582 | 112..35 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:04:38 has no hits.
BO30712.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:47 Download gff for
BO30712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13841-RA | 34..394 | 17..379 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:18 Download gff for
BO30712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13841-RA | 34..394 | 17..379 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:10:14 Download gff for
BO30712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13841-RA | 34..394 | 17..379 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:10:14 Download gff for
BO30712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22767171..22767437 | 113..379 | 99 | <- | Minus |
3R | 22767505..22767581 | 36..112 | 100 | <- | Minus |
3R | 22767648..22767665 | 17..35 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:18 Download gff for
BO30712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18592893..18593159 | 113..379 | 99 | <- | Minus |
arm_3R | 18593227..18593303 | 36..112 | 100 | <- | Minus |
arm_3R | 18593370..18593387 | 17..35 | 94 | | Minus |
BO30712.pep Sequence
Translation from 17 to 395
> BO30712.pep
MIRVTTCLLMFVFFVLYIHQNHADTKVLYEFHIREANQQRDEMGEFKDTS
EESDEEPELIITGKRTSSYVFPAKDNNYVYVETATYVADNNGYHVKYNIT
LDTVELDRRLSGQALKTTAGASFLDH
BO30712.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13841-PB | 120 | CG13841-PB | 1..120 | 1..120 | 625 | 100 | Plus |
CG13841-PA | 120 | CG13841-PA | 1..120 | 1..120 | 625 | 100 | Plus |