BO30715.complete Sequence
460 bp assembled on 2012-03-05
GenBank Submission: KX794862
> BO30715.complete
GAAGTTATCAGTCGACATGTTCAATATTATCCTTCTGGCAACAATCCTAG
TGAGCGTGGCTCAGGCCACAATCATCATTAAGCCCGAAAATCCCGTGGAG
GAGACCACCAAGTGCCAGATCTACTGGCGCGAACACGCCTGGGCTCTTGA
AGATTGTGTGTGCCGGGTCTTCCAGAACGGCTGTCTTCTGAACGAGGAGA
GCAATCGGCGGGAAAAGGCTGGAAAAACCCCTCTAATTCCGGTCACCGAG
CAGGTGTGCCAGAAGTTCATCAAGCGCAAGTGCTTCCTTGGATGGCCTGT
GCTGGCCAAGTTCCCGATTCCATCGCCATGCGGATGCAATGGCAAACAGG
GCAGTCTGGAAATCAAGAAGTTTTTGAGTCTGTGCGAACTGCAGAAGTAC
GCAGCTGAATGCAACAAACCCTATATCAGCTACTCGAAGTGTGCAAGCTT
TCTAGACCAT
BO30715.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:07:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7587-RA | 429 | CG7587-PA | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:07:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7587-RA | 550 | CG7587-RA | 38..463 | 17..442 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:07:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17594423..17594636 | 17..230 | 1070 | 100 | Plus |
| 3R | 32079331 | 3R | 17594702..17594890 | 231..419 | 945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:07:18 has no hits.
BO30715.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:51 Download gff for
BO30715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7587-RA | 43..463 | 22..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:42 Download gff for
BO30715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7587-RA | 43..463 | 22..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:11:22 Download gff for
BO30715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7587-RA | 43..463 | 22..444 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:11:22 Download gff for
BO30715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17594702..17594890 | 231..419 | 100 | -> | Plus |
| 3R | 17594948..17594970 | 420..444 | 92 | | Plus |
| 3R | 17594428..17594636 | 22..230 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:42 Download gff for
BO30715.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13420424..13420612 | 231..419 | 100 | -> | Plus |
| arm_3R | 13420670..13420692 | 420..444 | 92 | | Plus |
| arm_3R | 13420150..13420358 | 22..230 | 100 | -> | Plus |
BO30715.pep Sequence
Translation from 16 to 460
> BO30715.pep
MFNIILLATILVSVAQATIIIKPENPVEETTKCQIYWREHAWALEDCVCR
VFQNGCLLNEESNRREKAGKTPLIPVTEQVCQKFIKRKCFLGWPVLAKFP
IPSPCGCNGKQGSLEIKKFLSLCELQKYAAECNKPYISYSKCASFLDH
BO30715.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7587-PA | 142 | CG7587-PA | 1..142 | 1..142 | 772 | 100 | Plus |
| Sgs5-PA | 163 | CG7596-PA | 1..163 | 1..145 | 397 | 46 | Plus |
| CG42823-PA | 151 | CG42823-PA | 38..149 | 32..144 | 147 | 32.8 | Plus |
