Clone BO30717 Report

Search the DGRC for BO30717

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:307
Well:17
Vector:pDNR-Dual
Associated Gene/TranscriptCG15387-RA
Protein status:BO30717.pep: Imported from assembly
Sequenced Size:334

Clone Sequence Records

BO30717.complete Sequence

334 bp assembled on 2012-03-05

GenBank Submission: KX798283

> BO30717.complete
GAAGTTATCAGTCGACATGGACATAATACGCTGTGTAAATCAGCCGGAAA
ACTCGAAGAAACTCTCAGAGGCAAAGGCTTCCGCTGGAAAAGAGATGATT
CTCATGATGCAGCACGTTTTTCCATTGGTGATGCAACTCCAACTGGAGGT
CATTAAGGGTCATGGGTTTCCTGGAAACCGCGAGGGATTAGTCCAGTTCT
CCCAGCTCATCAGAGAAATGGAAAGGGACGACATGGAAATCGTACGCCTG
CGCAGTCAGATCCGCGCCATATACCTGCCCCCCATAGCTATAAACACCAC
CAACGACATCCTAATCGCAAGCTTTCTAGACCAT

BO30717.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15387-RB 351 CG15387-PB 49..348 17..316 1500 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:07:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG15387-RB 693 CG15387-RB 138..437 17..316 1500 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2225801..2226005 316..112 1010 99.5 Minus
2L 23513712 2L 2226057..2226157 117..17 505 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:07:51 has no hits.

BO30717.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:53 Download gff for BO30717.complete
Subject Subject Range Query Range Percent Splice Strand
CG15387-RA 388..687 17..318 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:53 Download gff for BO30717.complete
Subject Subject Range Query Range Percent Splice Strand
CG15387-RB 138..437 17..318 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:11:34 Download gff for BO30717.complete
Subject Subject Range Query Range Percent Splice Strand
CG15387-RB 138..437 17..318 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:11:34 Download gff for BO30717.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2225799..2226001 116..318 99 <- Minus
2L 2226059..2226157 17..115 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:53 Download gff for BO30717.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2225799..2226001 116..318 99 <- Minus
arm_2L 2226059..2226157 17..115 100   Minus

BO30717.pep Sequence

Translation from 16 to 334

> BO30717.pep
MDIIRCVNQPENSKKLSEAKASAGKEMILMMQHVFPLVMQLQLEVIKGHG
FPGNREGLVQFSQLIREMERDDMEIVRLRSQIRAIYLPPIAINTTNDILI
ASFLDH

BO30717.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG15387-PB 116 CG15387-PB 17..116 1..100 501 100 Plus