BO30719.complete Sequence
601 bp assembled on 2012-03-05
GenBank Submission: KX794292
> BO30719.complete
GAAGTTATCAGTCGACATGGCCGATTTCCATGAACTTATTGTGACTTGCA
TTATTTTCCTATACCAAATTATTTTGATTTTCCGATCAATCCACCCCTTC
AGAAAAGACGCTATGCTGCTTATTTTGCACAACGTTCTGCTGTACTACGT
GATCAATATGTTCAAGCATTTGGCCCAGGCATCGATTAACTCGGACGGAC
CGGTGAACACATTCTACTACGTACCATTGGTGTATGAAGAAAACATTGCC
TTGGGACGCCATCAGAGTTGGCATGAGGTCCTTAGGACATCCAGCTGGCA
ATTCTTTGAGGTCCTTTTCAGACATCATCTGGCCCTGCTGTTGCCATTTA
ATTTGGCTCTCCTGGTGCCCCGCTGCAAGTTGGCCTTCATTAGCACACTG
GTTCTCTTGTCGAACTTTGTGCTGTTCGTCTGTTTCGCCTCGGCCATTTG
TCAGCTGTTGTGGGTCCATGGCCACGCCCACAGCCTGCGCCTCCTCACAA
TCATGTGTTTGGGCCCCGTTTGCCAAGTGGTTCTGGTGTGCCGCCTCCTG
GGCCGCGTGTGGCTCAGTCAGTGGATTCTTGTTGCAAGCTTTCTAGACCA
T
BO30719.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:13:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15278-RA | 474 | CG15278-PA | 1..471 | 113..583 | 2355 | 100 | Plus |
| CG15278-RB | 495 | CG15278-PB | 1..451 | 113..563 | 2255 | 100 | Plus |
| CG15278-RC | 483 | CG15278-PC | 1..450 | 113..562 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:13:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15278-RA | 981 | CG15278-RA | 113..679 | 17..583 | 2835 | 100 | Plus |
| CG15278-RB | 995 | CG15278-RB | 113..659 | 17..563 | 2735 | 100 | Plus |
| CG15278-RC | 1714 | CG15278-RC | 113..658 | 17..562 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:13:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14875506..14875697 | 562..371 | 960 | 100 | Minus |
| 2L | 23513712 | 2L | 14875757..14875948 | 370..179 | 960 | 100 | Minus |
| 2L | 23513712 | 2L | 14876002..14876098 | 179..83 | 485 | 100 | Minus |
| 2L | 23513712 | 2L | 14876156..14876221 | 82..17 | 330 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:13:38 has no hits.
BO30719.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 17:15:22 Download gff for
BO30719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15278-RA | 16..582 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:54 Download gff for
BO30719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15278-RA | 32..598 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:06:35 Download gff for
BO30719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15278-RA | 113..679 | 17..585 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:06:35 Download gff for
BO30719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14875413..14875436 | 563..585 | 91 | <- | Minus |
| 2L | 14875506..14875697 | 371..562 | 100 | <- | Minus |
| 2L | 14875757..14875947 | 180..370 | 100 | <- | Minus |
| 2L | 14876002..14876098 | 83..179 | 100 | <- | Minus |
| 2L | 14876156..14876221 | 17..82 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:54 Download gff for
BO30719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14875413..14875436 | 563..585 | 91 | <- | Minus |
| arm_2L | 14875506..14875697 | 371..562 | 100 | <- | Minus |
| arm_2L | 14875757..14875947 | 180..370 | 100 | <- | Minus |
| arm_2L | 14876002..14876098 | 83..179 | 100 | <- | Minus |
| arm_2L | 14876156..14876221 | 17..82 | 100 | | Minus |
BO30719.pep Sequence
Translation from 16 to 601
> BO30719.pep
MADFHELIVTCIIFLYQIILIFRSIHPFRKDAMLLILHNVLLYYVINMFK
HLAQASINSDGPVNTFYYVPLVYEENIALGRHQSWHEVLRTSSWQFFEVL
FRHHLALLLPFNLALLVPRCKLAFISTLVLLSNFVLFVCFASAICQLLWV
HGHAHSLRLLTIMCLGPVCQVVLVCRLLGRVWLSQWILVASFLDH
BO30719.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15278-PA | 157 | CG15278-PA | 1..157 | 33..189 | 831 | 100 | Plus |
| CG15278-PB | 164 | CG15278-PB | 1..161 | 33..193 | 803 | 95 | Plus |
| CG15278-PC | 160 | CG15278-PC | 1..150 | 33..182 | 795 | 100 | Plus |
