BO30722.complete Sequence
619 bp assembled on 2012-03-05
GenBank Submission: KX796930
> BO30722.complete
GAAGTTATCAGTCGACATGAGCCACTTCGACTATCTGTTTAAGGTTCTCG
TCCTGGGTGACAGCGGCGTGGGCAAATCCTGCCTGCTAATGCGTTTCTCG
GATGACCGATTCACCGAGAAATACCTGAGAACGATGGGCATAGATGTCAA
GGCGCGCAGCGTGGAGCTGGTCAGTCGGGTGATGATGCTGCAGGTCTGGG
ATACCTCCGGCGACAAGCGCTTCAATTCGCTGATGCCGTCCAATTATCGC
AGTGCCCATGGCATACTGCTCGTCTACGACATAACGTCGTCCAAAAGTTT
CCAAAACATCGATGGCTGGATGAAGGAGATACGGCGCATGTGTCCGGATA
AGGTAACCGTCCTGCTGGTGGGCAACAAAAGTGATGATCCGAACCATCGC
CAGGTGAGCATGGAGCAGGGGTTCAACTATGCCCATCGTGGGGCACTCGG
CTTTGAAGAGGTTTCCGCCAAGAGTGGAATGAATGTATATGACATATTTA
GCTCGTTGGCAATGGACATATACCATCGTTATGTACTTCACAACCCGATC
AGCCCGATGCCATCTGAGCAGGAAGAGGAGGACGCTGCAGAGTCACCGGA
TGCAAGCTTTCTAGACCAT
BO30722.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:06:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RabX2-RA | 588 | CG2885-PA | 1..585 | 17..601 | 2925 | 100 | Plus |
Rab9Db-RA | 594 | CG9807-PA | 1..591 | 17..601 | 1665 | 86.5 | Plus |
Rab9E-RA | 594 | CG32673-PA | 1..591 | 17..601 | 1635 | 86.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:06:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RabX2-RA | 791 | CG2885-RA | 68..652 | 17..601 | 2925 | 100 | Plus |
Rab9Db-RA | 871 | CG9807-RA | 68..658 | 17..601 | 1665 | 86.5 | Plus |
Rab9E-RA | 889 | CG32673-RA | 86..676 | 17..601 | 1635 | 86.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:06:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10417496..10418080 | 17..601 | 2925 | 100 | Plus |
X | 23542271 | X | 10622568..10623158 | 601..17 | 1665 | 86.5 | Minus |
X | 23542271 | X | 10661168..10661758 | 601..17 | 1635 | 86.2 | Minus |
X | 23542271 | X | 10589182..10589772 | 17..601 | 1620 | 86 | Plus |
X | 23542271 | X | 10950373..10950963 | 601..17 | 1620 | 86 | Minus |
X | 23542271 | X | 10951907..10952419 | 529..17 | 1500 | 86.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:06:36 has no hits.
BO30722.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:50 Download gff for
BO30722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RabX2-RA | 12..596 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:35 Download gff for
BO30722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RabX2-RA | 68..652 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:11:07 Download gff for
BO30722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RabX2-RA | 68..652 | 17..603 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:11:07 Download gff for
BO30722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10417496..10418080 | 17..603 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:35 Download gff for
BO30722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10311529..10312113 | 17..603 | 99 | | Plus |
BO30722.pep Sequence
Translation from 16 to 619
> BO30722.pep
MSHFDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVE
LVSRVMMLQVWDTSGDKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDG
WMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGFNYAHRGALGFEEVS
AKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAESPDASFLD
H
BO30722.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RabX2-PA | 195 | CG2885-PA | 1..195 | 1..195 | 1018 | 100 | Plus |
Rab9Db-PA | 197 | CG9807-PA | 1..197 | 1..195 | 694 | 72.2 | Plus |
Rab9E-PA | 197 | CG32673-PA | 1..197 | 1..195 | 691 | 71.7 | Plus |
Rab9Fa-PA | 197 | CG32671-PA | 1..197 | 1..195 | 691 | 72.2 | Plus |
Rab9D-PA | 197 | CG32678-PA | 1..197 | 1..195 | 688 | 71.7 | Plus |