Clone BO30733 Report

Search the DGRC for BO30733

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:307
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptCG13474-RA
Protein status:BO30733.pep: Imported from assembly
Sequenced Size:478

Clone Sequence Records

BO30733.complete Sequence

478 bp assembled on 2012-03-05

GenBank Submission: KX795681

> BO30733.complete
GAAGTTATCAGTCGACATGCTACTACAAGCGGAATTTACAAAAATCGACG
ATGCCCTTGACATCTGTAGCTCCATGGAGGAGGATCTGAACGAGTGTCTG
AATATCGTAGGGGCCATGATCGAGAAGTACAATGCTCCCGGACGCTACAT
CATATCCATGGATCCCTTCGCTGAGGATTTTCAACTAAGCAACAGCGAGT
CCACGGACTTGGATGGGTCGTCTATTGGAAGTTGTGACTCCGAGCTGGAC
ATGCTAAGCCAACTCTACGGAGCCAGAAGTGCCCAGGAGTTGGATGAATC
TTACGTCGATGTGCGCTATAAGTTTATCAAGCTGAAGCGGTTCTTCGAGG
GTACCTTTACCCATTTTCTAAGGATCGTTGACTGTGCTGATCGTCAAAAT
AAGATTTCACATCGCATTTTTATGAACTCGCAGGATACCAAGGGGAAGCG
GTGCAGGCACGCAAGCTTTCTAGACCAT

BO30733.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:16:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG13474-RA 447 CG13474-PA 1..444 17..460 2160 99.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:16:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG13474-RA 555 CG13474-RA 5..449 16..460 2165 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:16:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14696657..14697101 460..16 2165 99.1 Minus
Blast to na_te.dros performed on 2014-11-28 08:16:43 has no hits.

BO30733.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:02 Download gff for BO30733.complete
Subject Subject Range Query Range Percent Splice Strand
CG13474-RA 6..449 17..462 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:47 Download gff for BO30733.complete
Subject Subject Range Query Range Percent Splice Strand
CG13474-RA 6..449 17..462 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:14:34 Download gff for BO30733.complete
Subject Subject Range Query Range Percent Splice Strand
CG13474-RA 6..449 17..462 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:14:34 Download gff for BO30733.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14696655..14697100 17..462 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:47 Download gff for BO30733.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14689755..14690200 17..462 98   Minus

BO30733.pep Sequence

Translation from 16 to 478

> BO30733.pep
MLLQAEFTKIDDALDICSSMEEDLNECLNIVGAMIEKYNAPGRYIISMDP
FAEDFQLSNSESTDLDGSSIGSCDSELDMLSQLYGARSAQELDESYVDVR
YKFIKLKRFFEGTFTHFLRIVDCADRQNKISHRIFMNSQDTKGKRCRHAS
FLDH

BO30733.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:41:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG13474-PA 148 CG13474-PA 1..148 1..148 769 100 Plus