BO30734.complete Sequence
355 bp assembled on 2012-03-05
GenBank Submission: KX796428
> BO30734.complete
GAAGTTATCAGTCGACATGAAGAGCGACGAGATCATCGAGAAGATACGCA
ACAAGTTGAAGGAATCGGATCCTGCCCGGCGCACCGTCGTCAACACGTTT
CAGTTCAACTTCACCGATGCGGATGGTAATCTCATCAAGAGCATGGCGTT
GGACATCTACGAGGGGAGTGCCACCAGTGTCGATGCACAGGTCACCATTT
CCGATGAGGACTTCTACTTGGTGGGCACTAAGCAGAAGACTTTCCAGGAG
GTGTTGCAGCAGGAGAAGGCTAAGATCGATGGCGATGAGGAGGCTATCAA
CAAAATGCTGGAGAAGTTTCGCATAAATTCTCAAAACGCAAGCTTTCTAG
ACCAT
BO30734.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:09:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12269-RA | 324 | CG12269-PA | 1..321 | 17..337 | 1605 | 100 | Plus |
| CG12269-RB | 339 | CG12269-PB | 1..336 | 17..337 | 1420 | 95.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:09:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12269-RA | 462 | CG12269-RA | 35..357 | 15..337 | 1615 | 100 | Plus |
| CG12269-RB | 477 | CG12269-RB | 35..372 | 15..337 | 1430 | 95.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:09:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18978378..18978569 | 337..146 | 960 | 100 | Minus |
| 3R | 32079331 | 3R | 18978644..18978775 | 146..15 | 660 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:09:48 has no hits.
BO30734.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:55 Download gff for
BO30734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12269-RA | 37..357 | 17..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:05 Download gff for
BO30734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12269-RA | 37..357 | 17..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:12:17 Download gff for
BO30734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12269-RA | 37..357 | 17..339 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:12:17 Download gff for
BO30734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18978374..18978568 | 147..339 | 98 | <- | Minus |
| 3R | 18978644..18978773 | 17..146 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:05 Download gff for
BO30734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14804096..14804290 | 147..339 | 98 | <- | Minus |
| arm_3R | 14804366..14804495 | 17..146 | 100 | | Minus |
BO30734.pep Sequence
Translation from 16 to 355
> BO30734.pep
MKSDEIIEKIRNKLKESDPARRTVVNTFQFNFTDADGNLIKSMALDIYEG
SATSVDAQVTISDEDFYLVGTKQKTFQEVLQQEKAKIDGDEEAINKMLEK
FRINSQNASFLDH
BO30734.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12269-PA | 107 | CG12269-PA | 1..107 | 1..107 | 533 | 100 | Plus |
| CG12269-PB | 112 | CG12269-PB | 1..112 | 1..107 | 517 | 95.5 | Plus |
