BO30735.complete Sequence
460 bp assembled on 2012-03-05
GenBank Submission: KX793931
> BO30735.complete
GAAGTTATCAGTCGACATGAAGGCCACTACTATTCTAGCCGTTGTTTCCG
TGCTCACCGCTTGTCTTTTGAGGAGCAGCGAGGCGGTGACCTGCACCGCC
GATGCCACTGTCACAGGATGCATTGACTGCACCACCAATCCAACCGATTC
CGAGTGCGTGGCCGAGGCAGCCGCCGATACAACCAGTACAACTGTAGCAA
CGCCCACCACCACCGCCACCACAACATCAGCGACGGCGACCACCACTGCG
GCCTCCAGCACAAACACTTCCTCCGGACGGCGAAAGATCGTGCGCATCAC
CAATCTGCGCTACACCAACGTTCGGCGCATCCGCGTCAACCGGAATGGAT
CGGGGAGCACCACCGTCCGGAATCGGAGGCGCAGGAACAACTCCAGACGT
GTCAACGTGAGGCGGGCCAATGGAAACGTTATTGTTGTCGGCGCAAGCTT
TCTAGACCAT
BO30735.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:09:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8087-RA | 429 | CG8087-PA | 1..426 | 17..442 | 2130 | 100 | Plus |
| CG14851-RA | 459 | CG14851-PA | 52..176 | 68..192 | 445 | 90.4 | Plus |
| CG14850-RA | 477 | CG14850-PA | 45..155 | 58..168 | 360 | 88.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:09:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8087-RA | 483 | CG8087-RA | 24..449 | 17..442 | 2130 | 100 | Plus |
| CG14851-RA | 506 | CG14851-RA | 74..198 | 68..192 | 445 | 90.4 | Plus |
| CG14850-RA | 587 | CG14850-RA | 92..202 | 58..168 | 360 | 88.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:09:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14564357..14564782 | 442..17 | 2130 | 100 | Minus |
| 3R | 32079331 | 3R | 14562413..14562537 | 68..192 | 445 | 90.4 | Plus |
| 3R | 32079331 | 3R | 14561026..14561136 | 58..168 | 360 | 88.3 | Plus |
Blast to na_te.dros performed 2014-11-28 08:09:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2388..2503 | 168..277 | 108 | 56.9 | Plus |
BO30735.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:56 Download gff for
BO30735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8087-RA | 1..426 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:08 Download gff for
BO30735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8087-RA | 24..449 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:12:21 Download gff for
BO30735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8087-RA | 24..449 | 17..444 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:12:21 Download gff for
BO30735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14564355..14564782 | 17..444 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:08 Download gff for
BO30735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10390077..10390504 | 17..444 | 99 | | Minus |
BO30735.pep Sequence
Translation from 16 to 460
> BO30735.pep
MKATTILAVVSVLTACLLRSSEAVTCTADATVTGCIDCTTNPTDSECVAE
AAADTTSTTVATPTTTATTTSATATTTAASSTNTSSGRRKIVRITNLRYT
NVRRIRVNRNGSGSTTVRNRRRRNNSRRVNVRRANGNVIVVGASFLDH
BO30735.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:41:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8087-PA | 142 | CG8087-PA | 1..142 | 1..142 | 701 | 100 | Plus |
| CG14851-PA | 152 | CG14851-PA | 1..150 | 1..141 | 404 | 60.1 | Plus |
| CG14850-PA | 158 | CG14850-PA | 1..134 | 1..133 | 267 | 49.3 | Plus |
| CG14237-PB | 121 | CG14237-PB | 29..112 | 54..135 | 194 | 51.2 | Plus |
| CG34273-PA | 128 | CG34273-PA | 21..104 | 51..133 | 161 | 41.7 | Plus |
