Clone BO30736 Report

Search the DGRC for BO30736

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:307
Well:36
Vector:pDNR-Dual
Associated Gene/TranscriptCG1138-RA
Protein status:BO30736.pep: Imported from assembly
Sequenced Size:904

Clone Sequence Records

BO30736.complete Sequence

904 bp assembled on 2012-03-05

GenBank Submission: KX799730

> BO30736.complete
GAAGTTATCAGTCGACATGAATTCATTACCAATACTGCAATCAGTGGACC
AAAATTTATCGTGCAAGGCAGCAGGAATAAGTAAAATGGAAAACACTAAA
CCAAATGATAAGAAACTGGCACAATCAAAGTTCGCATTCAAACATAACGG
GCCAAAAAAAGTGTTTCACTGCACGATGCAGAGTGTTTTGCAATCCGAAG
ATTGCTGGATCGCTGAGGAAGTTCTAGAAGAATCAAACGAGAAAAGCAAT
CTGGAACTCGAAGATATTTACGATGAGGTGTTTCGCTTAAAGCGGCGCGT
AAATCGACTCAATTACCAACTAGGTACCAATATACCGGAATGCCCAAAAA
TAGATCCCTGCCTGGATGATCATATATTTTTGACAAATGTAAAGGAAGTT
CATCCCGAAATTCTTCAGCTGAAGTTTGCAAGCCATAAACTACAGCACCA
ACTGACTCAGATGCAATCCGTCCGAAGATCATCCAATCTGGCCAAAAAAC
TGGTACGGGATGAATACTGCAGAAGCAAGAAATTAGGGGATCAGTTGCAG
ATTGAAATTCAAAAACTAGACTCCTTTAAGCTCAAATTCGAAAAACATCA
AGGACTATGTCTTCAACGGTTTAGGTTCTTGGACCAAGATAAGTATACTG
GCAGGGAGTTCTATGAATTTATAGAAAAAAGTAATGAGATGATAACAACT
CAACTTAAAAAGCAGATGTTAAAGAGTGAATACAAACCTTTTCGGAAGGA
AGCCGCTAGGGTGACAATCTCTTTAAAAACAGCCGCGGAAAATTTGCAAG
ATTATCTTTCAAGCGTGATAAATAACAAAAAATGTGAAATCTTCCAGAAC
GTGAAAAATTCCTGTGTATCCATTCGTTCAGACCTTGCAAGCTTTCTAGA
CCAT

BO30736.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:10:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG1138-RA 873 CG1138-PA 1..870 17..886 4350 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:10:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG1138-RA 1398 CG1138-RA 87..956 17..886 4350 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6597067..6597936 886..17 4350 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:10:40 has no hits.

BO30736.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:56 Download gff for BO30736.complete
Subject Subject Range Query Range Percent Splice Strand
CG1138-RA 87..956 17..888 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:13 Download gff for BO30736.complete
Subject Subject Range Query Range Percent Splice Strand
CG1138-RA 87..956 17..888 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:12:38 Download gff for BO30736.complete
Subject Subject Range Query Range Percent Splice Strand
CG1138-RA 87..956 17..888 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:12:38 Download gff for BO30736.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6597065..6597936 17..888 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:13 Download gff for BO30736.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2422787..2423658 17..888 99   Minus

BO30736.pep Sequence

Translation from 16 to 904

> BO30736.pep
MNSLPILQSVDQNLSCKAAGISKMENTKPNDKKLAQSKFAFKHNGPKKVF
HCTMQSVLQSEDCWIAEEVLEESNEKSNLELEDIYDEVFRLKRRVNRLNY
QLGTNIPECPKIDPCLDDHIFLTNVKEVHPEILQLKFASHKLQHQLTQMQ
SVRRSSNLAKKLVRDEYCRSKKLGDQLQIEIQKLDSFKLKFEKHQGLCLQ
RFRFLDQDKYTGREFYEFIEKSNEMITTQLKKQMLKSEYKPFRKEAARVT
ISLKTAAENLQDYLSSVINNKKCEIFQNVKNSCVSIRSDLASFLDH

BO30736.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:41:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG1138-PA 290 CG1138-PA 1..290 1..290 1500 100 Plus