Clone BO30737 Report

Search the DGRC for BO30737

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:307
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG4661-RA
Protein status:BO30737.pep: Imported from assembly
Sequenced Size:1933

Clone Sequence Records

BO30737.complete Sequence

1933 bp assembled on 2012-04-13

GenBank Submission: KX794050

> BO30737.complete
GAAGTTATCAGTCGACATGTCATCTAGATTCAAGTCGAGAATTCCGGAAC
GCGTTAGACACTCGCTAACGGTACTGGATGGTCCAAACTCGCGGATATCC
CGCATCCGTGATGCCGCGCTACCAAATCGCTGCTCGCTGAACCGCTCCCA
TTTGCCGATGCCAATAAGCAATACGCTGAGCGCTCTGGTGAAGCCAGTAT
CGCCGAAAGTTGTATTTAAGAAAACGCTAACGGATGAGGAAGCGGTAATC
CGCTCGCTGGTGCGACGTTCAAAACCGCTGGCAGTTCGTGGCAATCGTAC
ATCCTTTCGCCGCATTCAATTGGCTCACGCTGCGCCAATTGACGATTCTT
CCGTGCTGTTGAAAGCCACCAATAGCTTTTGCAGCACCAATTTTCAGCTG
CAAAAGCCCATAAAGGAGGCAAGTCCGGGTGCCACAGAGAAGGATCGTGC
CGCTAACAAAGTGAGGTCCGCAAAAAGTCTGCTGGATCTGGTGGCCGGAA
GAAGGCAACCGGGTATGGAACAAATACGTTTCCTTTGCAGCGATCATCGC
CTGATCAATGTGCCCAGTCCCTTGATGTATCGCCATTCGGAGGTGATGAG
CCGTTTGGAAGGGGAGGTGCAGCCAATTCCGTTGCGGTCCATTCGATCGG
CGACACTGCTACGTGTGATTATGTGGATGCACAAGAAGACTCTATGCGCA
AACGGAACTGAAAAAATCGCCGCGCCGACACCAACAGTTGAGACGTGCAT
TTGCGAAATAGGCAAAGGAAACGGATATACGAAAAGCGAGGCCAGCTGTC
AAATCAGTGAGAACACTCAAGGTAATGCTCAACAAACGGTAAATTTAACA
TGTCAGATCCTCGGCGAAAAAATCGAAAATGATTGCACAAAAATACTTAA
GAATGTAGAATTTGATTATGACCATACACCGATTAGAAATGATAATATCG
AGAATAGTTGTGAAAACAATGATGAAAGTGTTAATGACGAGGCAGGTGTT
ATAAGCAATCAAACAAGCGACTCAATGGAAAGTTTCGAAAATAACTTGCA
AAATCAAGAAAATTTTATGGTCGAATGTTCTACAGATATCAAATGTAATG
ATTACAAACAAAACGAAAATCAAAAAGACGAGAACTGCACAATTATAGAT
GAAAATAATGGAAAGTTAGTGTTATATAATCCAAACATTCAATTAATTCA
AAATAACGAAAACACAAACAAAAGTAGTAGAGATTGCAAGAATGATACAA
TTAATGAATTCACAAAAGTAAATGGTAACTATCAAGATTACATTCAAATT
ACCGAAATTGGCAATAATAATATCACAGGTGTAAATACTGGCGAAGATGA
ACGTGAAATCGGTTGCTTAAAAAGCACGGATAAAATCGTAATTCATGCCA
ATGTGATGCAAAATTTTTGTAAACGAAATATATGGAAATGCAATGGGATT
AGAAGGTGTACAGGCGAGGATGCCAACGATGATCAATGCGTTGCTAACTT
AAATGAAATGAAGCGTTCCTCATTTCTTCTTTGCTCATGGGAAGAGCGAT
TGTTGGGCAGCGAACTGTACCAGCTGGTGGAAATTATCCTGGCGTCTCAT
TATTTGGGCATCGAGTCGCTGACACTGAACGCCATTCATCATTTCTGTGA
ACTAATGGCTCAAAGGACTCGCTCGGAATGCTGCCTAATGCTAGGGATCA
AGACACGATTGGCTAGTGAGCGCCAAACTTTGGATAACCACTGTCCGTTG
ATCAGGGACTCACTGTCGCGAAATAATCAAGCAGATAGGACCGAAAATAT
GAAGCAGCAATTTGAATCCAGAATCTTCAGGAAACCACAACCGAACGGAA
AGGCAGCTGTAGGAGGTGGAATGGGAGATGGACTTTATGCCAAAAAGCCT
CGCAGTCGCAACCATGCAAGCTTTCTAGACCAT

BO30737.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:56:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG4661-RA 1902 CG4661-PA 1..1899 17..1915 9495 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:56:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG4661-RA 2035 CG4661-RA 62..1962 15..1915 9505 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:56:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12855761..12857661 1915..15 9505 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:56:21 has no hits.

BO30737.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-13 10:26:39 Download gff for BO30737.complete
Subject Subject Range Query Range Percent Splice Strand
CG4661-RA 64..1962 17..1917 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:55 Download gff for BO30737.complete
Subject Subject Range Query Range Percent Splice Strand
CG4661-RA 64..1962 17..1917 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:40:19 Download gff for BO30737.complete
Subject Subject Range Query Range Percent Splice Strand
CG4661-RA 64..1962 17..1917 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:40:19 Download gff for BO30737.complete
Subject Subject Range Query Range Percent Splice Strand
X 12855759..12857659 17..1917 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:55 Download gff for BO30737.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 12749792..12751692 17..1917 99   Minus

BO30737.pep Sequence

Translation from 16 to 1933

> BO30737.pep
MSSRFKSRIPERVRHSLTVLDGPNSRISRIRDAALPNRCSLNRSHLPMPI
SNTLSALVKPVSPKVVFKKTLTDEEAVIRSLVRRSKPLAVRGNRTSFRRI
QLAHAAPIDDSSVLLKATNSFCSTNFQLQKPIKEASPGATEKDRAANKVR
SAKSLLDLVAGRRQPGMEQIRFLCSDHRLINVPSPLMYRHSEVMSRLEGE
VQPIPLRSIRSATLLRVIMWMHKKTLCANGTEKIAAPTPTVETCICEIGK
GNGYTKSEASCQISENTQGNAQQTVNLTCQILGEKIENDCTKILKNVEFD
YDHTPIRNDNIENSCENNDESVNDEAGVISNQTSDSMESFENNLQNQENF
MVECSTDIKCNDYKQNENQKDENCTIIDENNGKLVLYNPNIQLIQNNENT
NKSSRDCKNDTINEFTKVNGNYQDYIQITEIGNNNITGVNTGEDEREIGC
LKSTDKIVIHANVMQNFCKRNIWKCNGIRRCTGEDANDDQCVANLNEMKR
SSFLLCSWEERLLGSELYQLVEIILASHYLGIESLTLNAIHHFCELMAQR
TRSECCLMLGIKTRLASERQTLDNHCPLIRDSLSRNNQADRTENMKQQFE
SRIFRKPQPNGKAAVGGGMGDGLYAKKPRSRNHASFLDH

BO30737.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG4661-PA 633 CG4661-PA 1..633 1..633 3311 100 Plus