BO30738.complete Sequence
421 bp assembled on 2012-03-05
GenBank Submission: KX796650
> BO30738.complete
GAAGTTATCAGTCGACATGGACTTGAAAATGGAGCTGGGCGGCTACGTGC
ACTCCGCACCCAACACCAAGCGCTTCGTTGTGGAGGACTCGATTACCAAG
GTGACCTCTGATGGGGAGCCGCACGGCATGATGACCATGGTGGCCGGATT
ATCCGGCCTTTTGGCGGCCATCATCATTTTGGCCGTCCTCGTGTCCATGG
TATCTTGTCGCAAGCAGAAGAGCACCAACCGGAAGAGCAATTCCTCCGCC
AATGTGGTGGCCATGACCAGTGTGGCGCAGGATCAGCCCCAGTTGGCCGG
TAACTTGAACGCAGCGTTCGCTGAGAGCACTCTGACCTTGGACAAGGTCA
AGCAGGACACAGAGGATCAATGGCGACCCACAGCCGTGGTGGTGGAGCGG
TACGCAAGCTTTCTAGACCAT
BO30738.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:17:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13012-RE | 390 | CG13012-PE | 1..387 | 17..403 | 1935 | 100 | Plus |
| CG13012-RD | 390 | CG13012-PD | 1..387 | 17..403 | 1935 | 100 | Plus |
| CG13012-RC | 390 | CG13012-PC | 1..387 | 17..403 | 1935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:17:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13012-RE | 1199 | CG13012-RE | 585..973 | 15..403 | 1945 | 100 | Plus |
| CG13012-RD | 740 | CG13012-RD | 126..514 | 15..403 | 1945 | 100 | Plus |
| CG13012-RC | 1234 | CG13012-RC | 620..1008 | 15..403 | 1945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:17:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16669044..16669226 | 403..221 | 915 | 100 | Minus |
| X | 23542271 | X | 16669313..16669442 | 222..93 | 650 | 100 | Minus |
| X | 23542271 | X | 16670057..16670134 | 92..15 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:17:10 has no hits.
BO30738.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:02 Download gff for
BO30738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13012-RB | 111..497 | 17..405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:53 Download gff for
BO30738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13012-RC | 622..1008 | 17..405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:14:42 Download gff for
BO30738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13012-RC | 622..1008 | 17..405 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:14:42 Download gff for
BO30738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16669042..16669224 | 223..405 | 98 | <- | Minus |
| X | 16669313..16669442 | 93..222 | 100 | <- | Minus |
| X | 16670057..16670132 | 17..92 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:53 Download gff for
BO30738.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16563075..16563257 | 223..405 | 98 | <- | Minus |
| arm_X | 16563346..16563475 | 93..222 | 100 | <- | Minus |
| arm_X | 16564090..16564165 | 17..92 | 100 | | Minus |
BO30738.pep Sequence
Translation from 16 to 421
> BO30738.pep
MDLKMELGGYVHSAPNTKRFVVEDSITKVTSDGEPHGMMTMVAGLSGLLA
AIIILAVLVSMVSCRKQKSTNRKSNSSANVVAMTSVAQDQPQLAGNLNAA
FAESTLTLDKVKQDTEDQWRPTAVVVERYASFLDH
BO30738.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:41:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13012-PE | 129 | CG13012-PE | 1..129 | 1..129 | 640 | 100 | Plus |
| CG13012-PD | 129 | CG13012-PD | 1..129 | 1..129 | 640 | 100 | Plus |
| CG13012-PC | 129 | CG13012-PC | 1..129 | 1..129 | 640 | 100 | Plus |
| CG13012-PB | 129 | CG13012-PB | 1..129 | 1..129 | 640 | 100 | Plus |
