BO30741.complete Sequence
1585 bp assembled on 2012-04-13
GenBank Submission: KX796839
> BO30741.complete
GAAGTTATCAGTCGACATGGCAAAGAATTATTGGGGGTTTTTCCTTTTCT
GTTTAGCCCTTGGATTAATGCTGAATTTGAGTCAGCAGGCTTCACTTTTC
AAGAGAGATTTCTATACAGCTGGTGTGGTGGAGTTTGAGCCATCCAATGA
ATTGTCCGACAATCTAGCTGGCTATTTGGAGATAATCCAGTCGCAGAATG
CCACTTCTACGGACATCATTGTGTTCCCCGAGAGCACACTGAACTCCGCG
GGTTCCACGACCTTTGTGCCCAATCCCGAGGATCAGATAAACCCCTGTTT
GAGTGATCCCAATGCCACCTACTATGAGGAGTTTCTGGTGACCCTGTCGT
GTGCGGCCCGCAATGCCAGTAAATACATTGTGATCAATCTGACCGAGAAG
CAGAAGTGCGAGGATATTCCCGAGGATACGAGGCCATGTGCATCTAACGG
ACTGAATGTTTTCAACACCAATGTAGTGTTCGATCGTCAGGGAGTGGTGG
TGTCCAGGTACCGAAAGGTTCATCTCTATGGTGAGCCCAAGAACAGCACT
TTTCTGCCGGAACTGAGCACCTTCGAGACAGACTTTGGGGTCACCTTCGG
TCATTTTATCTGTTTCGACATCCTGTTCTATACTCCCGCCCATCAACTCA
TCGTGGAGCAGGGTATTACGGACTTCGTGTATCCGGCCATGTGGTTCTCC
CAACTGCCCTTCCTCACAGCTGTTCAAATTCAGCTGGGTTGGTCCTATGC
CAACAATGTGAATTTGCTGGCTGCTGGAGCAAGTGATCCCATTGTTGGAA
ATAGTGGATCGGGCATTTATCACGGACGCAGTGGCTCACTAAGAAGTGTG
ATGCGGCAGGAGTCCGGTGAGAGAAGTATATATGTGGCCCGGGTACCCAA
ATACAGGGCCAAAAGGCGGATGAAGCGAGATCTCAAACGTCAAGTGGCCA
CCAGTTCAAGTTTCAACATCAAACGGGATTATCTGGAAAACTTCACCAGC
GAGGAGCTGAAAATCGACGCTGGAAAGATCGGTAATCTTAGCCAGAATCT
GTGTCACGGTGGCTTCTGTTGTCACTTCGATCTGGCCTGGAGATCCTTGG
GGAAACCCTCGAGGAACACCAGTCACTACAGCTATCGAGTGGGCATCTAT
GAGGGTTGGCGTAATGAGAAGAGACTGGATGTCAACTATATTCGCAATTG
TGGCGTATTCACCTGCTCTGGAAATTCGATAGATGATTGTGGTCAGCTGC
TGCCTGACATTCAGAGGCCGCTGGTGACTTTCACCCATGTGGAGATTAGG
GTCACATATCCGCAGTCTCGGGAGTTCCTTCTGTTTCCCGATACCCTGCT
CGATAATCTTCTGCCTCTGGAGCCCAAACAATTCGAGTGGTCACAAAAAC
GGATCTCCGAGGAGAGTCACCAAGTGCGTTTTGCATTGAGGAAATCCCTA
GAGGTCAAGCACCTTTTGACCTTTGGCATTTATGGAAATTACTACAATAA
TGAGTGCACTTTTGGAGTGGGAACAGCAGAAGAGCAATTGGAATGCGGCT
ATAAAAATCCGAAAATAGCAAGCTTTCTAGACCAT
BO30741.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:56:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32751-RA | 1554 | CG32751-PA | 1..1551 | 17..1567 | 7755 | 100 | Plus |
| CG32751-RB | 1578 | CG32751-PB | 726..1575 | 718..1567 | 4250 | 100 | Plus |
| CG32751-RB | 1578 | CG32751-PB | 1..703 | 17..719 | 3515 | 100 | Plus |
| vanin-like-RA | 1677 | CG32754-PA | 163..896 | 167..900 | 2620 | 90.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:56:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32751-RA | 1603 | CG32751-RA | 35..1587 | 15..1567 | 7765 | 100 | Plus |
| CG32751-RB | 1758 | CG32751-RB | 762..1611 | 718..1567 | 4250 | 100 | Plus |
| CG32751-RB | 1758 | CG32751-RB | 35..739 | 15..719 | 3525 | 100 | Plus |
| vanin-like-RA | 1864 | CG32754-RA | 180..913 | 167..900 | 2620 | 90.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:56:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6196931..6197629 | 1416..718 | 3495 | 100 | Minus |
| X | 23542271 | X | 6197860..6198493 | 719..86 | 3170 | 100 | Minus |
| X | 23542271 | X | 6201766..6202316 | 717..167 | 2350 | 95.1 | Minus |
| X | 23542271 | X | 6196727..6196879 | 1567..1415 | 765 | 100 | Minus |
| X | 23542271 | X | 6198546..6198620 | 89..15 | 375 | 100 | Minus |
| X | 23542271 | X | 6201202..6201387 | 900..715 | 300 | 77.4 | Minus |
| X | 23542271 | X | 6200447..6200534 | 1553..1466 | 215 | 83 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:56:38 has no hits.
BO30741.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-13 10:26:40 Download gff for
BO30741.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32751-RA | 37..1587 | 17..1569 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:58 Download gff for
BO30741.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32751-RA | 37..1587 | 17..1569 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:40:24 Download gff for
BO30741.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32751-RA | 37..1587 | 17..1569 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:40:24 Download gff for
BO30741.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6196725..6196877 | 1417..1569 | 98 | <- | Minus |
| X | 6196931..6197627 | 720..1416 | 100 | <- | Minus |
| X | 6197860..6198490 | 89..719 | 100 | <- | Minus |
| X | 6198547..6198618 | 17..88 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:58 Download gff for
BO30741.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6090758..6090910 | 1417..1569 | 98 | <- | Minus |
| arm_X | 6090964..6091660 | 720..1416 | 100 | <- | Minus |
| arm_X | 6091893..6092523 | 89..719 | 100 | <- | Minus |
| arm_X | 6092580..6092651 | 17..88 | 100 | | Minus |
BO30741.pep Sequence
Translation from 16 to 1585
> BO30741.pep
MAKNYWGFFLFCLALGLMLNLSQQASLFKRDFYTAGVVEFEPSNELSDNL
AGYLEIIQSQNATSTDIIVFPESTLNSAGSTTFVPNPEDQINPCLSDPNA
TYYEEFLVTLSCAARNASKYIVINLTEKQKCEDIPEDTRPCASNGLNVFN
TNVVFDRQGVVVSRYRKVHLYGEPKNSTFLPELSTFETDFGVTFGHFICF
DILFYTPAHQLIVEQGITDFVYPAMWFSQLPFLTAVQIQLGWSYANNVNL
LAAGASDPIVGNSGSGIYHGRSGSLRSVMRQESGERSIYVARVPKYRAKR
RMKRDLKRQVATSSSFNIKRDYLENFTSEELKIDAGKIGNLSQNLCHGGF
CCHFDLAWRSLGKPSRNTSHYSYRVGIYEGWRNEKRLDVNYIRNCGVFTC
SGNSIDDCGQLLPDIQRPLVTFTHVEIRVTYPQSREFLLFPDTLLDNLLP
LEPKQFEWSQKRISEESHQVRFALRKSLEVKHLLTFGIYGNYYNNECTFG
VGTAEEQLECGYKNPKIASFLDH
BO30741.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32751-PA | 517 | CG32751-PA | 1..517 | 1..517 | 2747 | 100 | Plus |
| CG32751-PB | 525 | CG32751-PB | 1..525 | 1..517 | 2728 | 98.5 | Plus |
| vanin-like-PA | 558 | CG32754-PA | 1..531 | 1..514 | 2071 | 73.8 | Plus |
| CG32750-PA | 523 | CG32750-PA | 8..502 | 9..502 | 803 | 38.7 | Plus |
| Btd-PA | 553 | CG3599-PA | 9..510 | 13..495 | 759 | 37.9 | Plus |
