BO30742.complete Sequence
490 bp assembled on 2012-03-05
GenBank Submission: KX798374
> BO30742.complete
GAAGTTATCAGTCGACATGTGCCAGAACAAGATCAACACCAACAACACCA
TGACCATCAAATCGAACAAGAAGCTGTCCTACAGCGTGAAGAAACTGCTG
CAGAAGATCTTCAAGCAGCAACAGCGCGTCGAGGAGGAGCAGAACCTCAA
GAACGCCCTCAAGGCCAACTCTTTGGAGTCTCTGGAATCCATGGAAAACA
GCCGCAACGCCGATCTGGAATCCGCCTCCATCTGCGCCTCTCTGGAGTCC
TGCGAGAACGAGGCCAACGAGCGTCTCTCCCAGTCCTGCGAAATTGAGGA
CTACGACTTCGAGCAACTGCCCACCGTTCCCGTTCACTTCGTCCGCACCG
CTCACGGCACATTCTTCTGGACCGCCGTCTCCGATTTGCCAGCCGACAAC
GACCTCGTCGAGCCCCTCTACTGCAGCACCTCCAACGCCATCGCTATCCC
CCAGGATCGTTGGGTTCAGGCCGCAAGCTTTCTAGACCAT
BO30742.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:18:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(spl)m4-BFM-RA | 459 | CG6099-PA | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:18:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(spl)m4-BFM-RA | 759 | CG6099-RA | 86..542 | 16..472 | 2285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:18:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26024038..26024494 | 472..16 | 2285 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 08:18:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2289..2430 | 9..154 | 134 | 61.3 | Plus |
BO30742.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:04 Download gff for
BO30742.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
m4-RA | 66..521 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:07 Download gff for
BO30742.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)m4-BFM-RA | 87..542 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:15:06 Download gff for
BO30742.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)m4-BFM-RA | 87..542 | 17..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:15:06 Download gff for
BO30742.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26024036..26024493 | 17..474 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:07 Download gff for
BO30742.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21849758..21850215 | 17..474 | 99 | | Minus |
BO30742.pep Sequence
Translation from 16 to 490
> BO30742.pep
MCQNKINTNNTMTIKSNKKLSYSVKKLLQKIFKQQQRVEEEQNLKNALKA
NSLESLESMENSRNADLESASICASLESCENEANERLSQSCEIEDYDFEQ
LPTVPVHFVRTAHGTFFWTAVSDLPADNDLVEPLYCSTSNAIAIPQDRWV
QAASFLDH
BO30742.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:41:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(spl)m4-BFM-PA | 152 | CG6099-PA | 1..152 | 1..152 | 784 | 100 | Plus |
E(spl)malpha-BFM-PA | 138 | CG8337-PA | 1..138 | 1..152 | 217 | 39.8 | Plus |