BO30744.complete Sequence
928 bp assembled on 2012-03-05
GenBank Submission: KX797554
> BO30744.complete
GAAGTTATCAGTCGACATGTTCCAACATTTCAAGCAGATCTATGCTGGGC
TGGGTGTCAGTTCTCTGATGGTCACCCTGGCCATCCTACTGCTCCTTCAG
CCCGTGGATGCACGCTGGACTCGCAGACCCAGGCGTACCACCACGCCAAG
GAGCACCACAAGCATAACCACCGCGAATCCGGATCGTCATCAGCATGTGC
ACCACTGGCCACCATTGGTGGCACCACCGCCACAGCCTCAACCACAGCCA
CCAGTGGTTGTGGTGCAGAAGCCAAGTCACACGGAGACCAGTCCCCGTCT
CGTCGATAGCTTCGATCAGAGATCACTGGACGGGCAGTACGAGTTCAGAT
ATCAGCTGGATAATGGCAACACGCGATATGAGCGCGCCTACTGGCTGCCC
GTGGGCAAGGATCTCGTTCTGGCCAAGAAGGGATACTATTCGGTGCCACT
GCCAAACGACAAGTACTCCACGGTGTTCTACACCGCCGATCATCGTGGCT
ACCATGTGGACATGCAGACATTATCCGTAGAGCAGCCGCTATTGCCGCGC
AGCCTGGAAGTGCCCGGAGTGGAAAGGGATGTGGGATCGGGAATGGGAAT
GGGCACCGGAATAGCCACGGGTACGGGGACTAAGCGAAATTCAATAAGCG
ACCCGGAGCGTAACGAGCTGCCTGTGGAAGTGGAAGTGAATGAGGCTGAG
GATGTGGATGTGGATGTGGACGCAAGTGATGCTGGCACCGAGCTGGTTCC
TAATGCTGTAAACCAAGTCGAAACCGAAACCGAACCATCAACTTTGGCCA
ACGACATTTTGGCAACTGGAGCACCAGCCGACAGCCATGATGATGATCAC
GATGACGATGGCGATGAGGATGGGGATGACGATGTTGATGATGATGAAGG
CGCCTCAAACGCAAGCTTTCTAGACCAT
BO30744.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:18:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15756-RA | 897 | CG15756-PA | 1..894 | 17..910 | 4470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:18:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15756-RA | 1369 | CG15756-RA | 72..967 | 15..910 | 4480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:18:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13534471..13534804 | 15..348 | 1670 | 100 | Plus |
| X | 23542271 | X | 13535098..13535337 | 516..755 | 1200 | 100 | Plus |
| X | 23542271 | X | 13534863..13535032 | 346..515 | 850 | 100 | Plus |
| X | 23542271 | X | 13535645..13535800 | 755..910 | 780 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 08:18:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 1967..2036 | 191..258 | 120 | 65.7 | Plus |
BO30744.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:05 Download gff for
BO30744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15756-RA | 6..894 | 22..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:09 Download gff for
BO30744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15756-RA | 79..967 | 22..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:15:07 Download gff for
BO30744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15756-RA | 79..967 | 22..912 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:15:07 Download gff for
BO30744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13534866..13535032 | 349..515 | 100 | -> | Plus |
| X | 13534478..13534804 | 22..348 | 100 | -> | Plus |
| X | 13535098..13535336 | 516..754 | 100 | -> | Plus |
| X | 13535645..13535800 | 755..912 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:09 Download gff for
BO30744.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13428511..13428837 | 22..348 | 100 | -> | Plus |
| arm_X | 13428899..13429065 | 349..515 | 100 | -> | Plus |
| arm_X | 13429131..13429369 | 516..754 | 100 | -> | Plus |
| arm_X | 13429678..13429833 | 755..912 | 98 | | Plus |
BO30744.pep Sequence
Translation from 16 to 928
> BO30744.pep
MFQHFKQIYAGLGVSSLMVTLAILLLLQPVDARWTRRPRRTTTPRSTTSI
TTANPDRHQHVHHWPPLVAPPPQPQPQPPVVVVQKPSHTETSPRLVDSFD
QRSLDGQYEFRYQLDNGNTRYERAYWLPVGKDLVLAKKGYYSVPLPNDKY
STVFYTADHRGYHVDMQTLSVEQPLLPRSLEVPGVERDVGSGMGMGTGIA
TGTGTKRNSISDPERNELPVEVEVNEAEDVDVDVDASDAGTELVPNAVNQ
VETETEPSTLANDILATGAPADSHDDDHDDDGDEDGDDDVDDDEGASNAS
FLDH
BO30744.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:41:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15756-PA | 298 | CG15756-PA | 1..298 | 1..298 | 1584 | 100 | Plus |
| Cpr12A-PA | 173 | CG15757-PA | 18..123 | 80..185 | 223 | 41.5 | Plus |
