BO30745.complete Sequence
2047 bp assembled on 2012-04-13
GenBank Submission: KX794663
> BO30745.complete
GAAGTTATCAGTCGACATGGGTAATGCACAGGGACAGAACGGCTTCGAGG
AACTCCGGCGATATGTGAAGCAGGGCGGTGATTTTAGCAAGGAGCTCATC
TTTGTCCTGCAGGAGAGAGCCGATTCGGAGCTGATCTACTCCAAGTCGCT
ATCGAAACTGGCCAACAAGCTGAACAAAGCGGGCAGGGAAATTCCCGGGA
GCGTGGCCGACGCCTGGCGTGGAGTGGCTACGGAGATGGAGAGCCGCAGC
GACATCCATCGCCAGTTGGCAGCCTCGCTAACGGATGAGCTGGTCAAGCC
GCTCAAGATCGTCGTCGAAGGACATCACAAGGCGCGCAAGGCGGTGGAAA
GCAACGTGGACAAGGCGGCGCGAGTACTGGGCGAATGGCGAGCCAGCGAG
GCGAAAGCCAAGAAGGCCTCCCATACGGCGGCGCGCGAGAACGAGAAGCT
GCAGGACGCAATGCTGGACGTGCGCATCCAGAAGTCACCATCGATTGCCC
TGCTCCACCAGGGACCCAACAAGCAGGCCGCAGAAAAGGAGCTCAAGTCA
GCGGAGAAGGATTGCGTCAAGCTGGATAACAAGCGCAAGAAGGCCGAGGA
GGCGGTGAAGCGTGCGGATGTGGAATACTACACCCTGTGCGTGCGTTCGG
AGCGAGCACGCGTAGACTGGGAGATGGCCGTGCTCCGGGGAAGTGCCCAA
CTGCAGAGCAGCGAACAGCAGCGGCTGGGCAATATGCACAACTTTGCCCA
GCAGTATGCACGCCTCATCTCGGACATGAATCCGATACTCGGTGGCCTGA
GCACACGCCTGCAGCCGCAACTCGATGCTTGCAATGTGGCTAAGGATATG
CAAGTGGTGCGCCACATCCGCCGCAATTCGGAGGGACCCAGTGAGCAACT
CCTACCGGACTTTTACTGCGAACACACCACGCTGGCCATGAATCGGGAGC
GTCGCAAGCACGCTCTGATCAAGCTGCTGCAGCTGGTCAAGACGGATCTG
GAGCGGGAGCGACGATCCCGCGACGGATTGAGGGGACTGTCGCAATCGCT
TAACCATCAGGAGCATCAGAACATCACCGATAAGCTGTACCACATTCGTT
CCATGCTGACCTATTTGGAGGGCGCCCGTCTCAAGCTGCACTCTGCCCTC
TTGGAGCTGGACCACAAGCCCAGAGCCACTCACCCACTGGCCCAGCACAT
TCATATCACCCGTGACCGCACTGGTTTGCAGCAGAGCATCCTGAAGGTGC
CCAACTGGCTGAAGAACAACGACAAGTCGCAGACGCAGCAATCGACCAGT
ATGCTGGCCCACGACATCACCGACATAACCACTAACCACGAGGATGAGCT
TCCCGACGAGAACTGCTCCCACCTGCACAGCAGTAGCCATAGCAACAATA
ATAGCAACGGCTCCTGCACAGATGTCAGTTCGGTGGTGAAGCCTTTTAAC
CGAAGCAAAAGCAACATCGAGACCAATTTCACCAGTCAACCAAAGATAAT
CTCGACGACAAATGCCGCGATTGCCGTGTCCGTTAAGTCCAAAACCCTGG
CCAATCTGCAGGATGGCCATCACAATAACCAACAGCACCATCATCATCAT
CATAATCATCACAGCGATCGCGGCCAGGCGGATGGTGGATCCAATCAGCA
GGACTCTGATTTCGATGAGTTCAGCTCGCAGGACGAGGACGACGAGCCGC
AGCAGCCGCAGCAACAACCGCAGCCGTTGCAATCGCAGCAGCAGCAACAG
CAGCCGTTGCTGCAAAATCCAACCATCAATGGCCAAGTGCAGACGCAGCA
TTTCTATCAGAATGCGCAGGAACTGCAGAAGGGCCAAAAGAACGGATCCG
TTCCGATACTGGGACGCTGCAAGGCACTGTATAGCTACACCCCGAAGCTC
TACGACGAGCTGGAACTGAGTCCCGGCGACATCATCGAGGTGCATGCCAA
ACAGGACGACGGCTGGTGGCTGGGCGCCCTGCGCAATCACATCGGCATCT
TTCCGGCCACCTATGTGGAGGAGTGCGCCGCAAGCTTTCTAGACCAT
BO30745.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:57:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42388-RC | 2307 | CG42388-PC | 292..2304 | 17..2029 | 10065 | 100 | Plus |
| CG42388-RF | 2016 | CG42388-PF | 1..2013 | 17..2029 | 10065 | 100 | Plus |
| CG42388-RG | 3678 | CG42388-PG | 1676..3675 | 30..2029 | 10000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:57:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42388-RC | 3014 | CG42388-RC | 957..2969 | 17..2029 | 10065 | 100 | Plus |
| CG42388-RF | 2508 | CG42388-RF | 451..2463 | 17..2029 | 10065 | 100 | Plus |
| CG42388-RG | 5133 | CG42388-RG | 1833..3832 | 30..2029 | 10000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:57:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9052450..9053274 | 1205..2029 | 4125 | 100 | Plus |
| X | 23542271 | X | 9051467..9052217 | 343..1093 | 3755 | 100 | Plus |
| X | 23542271 | X | 9051183..9051412 | 116..345 | 1150 | 100 | Plus |
| X | 23542271 | X | 9052278..9052388 | 1094..1204 | 555 | 100 | Plus |
| X | 23542271 | X | 9051033..9051122 | 28..117 | 450 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 04:57:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 2631..2708 | 1438..1513 | 115 | 62.8 | Plus |
BO30745.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-13 10:26:41 Download gff for
BO30745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42388-RC | 957..2969 | 17..2031 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:03 Download gff for
BO30745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42388-RF | 451..2463 | 17..2031 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:40:41 Download gff for
BO30745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42388-RF | 451..2463 | 17..2031 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:40:41 Download gff for
BO30745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9051030..9051122 | 22..117 | 96 | -> | Plus |
| X | 9051185..9051410 | 118..343 | 100 | -> | Plus |
| X | 9051468..9052217 | 344..1093 | 100 | -> | Plus |
| X | 9052278..9052388 | 1094..1204 | 100 | -> | Plus |
| X | 9052450..9053274 | 1205..2031 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:03 Download gff for
BO30745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8945063..8945155 | 22..117 | 96 | -> | Plus |
| arm_X | 8945218..8945443 | 118..343 | 100 | -> | Plus |
| arm_X | 8945501..8946250 | 344..1093 | 100 | -> | Plus |
| arm_X | 8946311..8946421 | 1094..1204 | 100 | -> | Plus |
| arm_X | 8946483..8947307 | 1205..2031 | 99 | | Plus |
BO30745.pep Sequence
Translation from 16 to 2047
> BO30745.pep
MGNAQGQNGFEELRRYVKQGGDFSKELIFVLQERADSELIYSKSLSKLAN
KLNKAGREIPGSVADAWRGVATEMESRSDIHRQLAASLTDELVKPLKIVV
EGHHKARKAVESNVDKAARVLGEWRASEAKAKKASHTAARENEKLQDAML
DVRIQKSPSIALLHQGPNKQAAEKELKSAEKDCVKLDNKRKKAEEAVKRA
DVEYYTLCVRSERARVDWEMAVLRGSAQLQSSEQQRLGNMHNFAQQYARL
ISDMNPILGGLSTRLQPQLDACNVAKDMQVVRHIRRNSEGPSEQLLPDFY
CEHTTLAMNRERRKHALIKLLQLVKTDLERERRSRDGLRGLSQSLNHQEH
QNITDKLYHIRSMLTYLEGARLKLHSALLELDHKPRATHPLAQHIHITRD
RTGLQQSILKVPNWLKNNDKSQTQQSTSMLAHDITDITTNHEDELPDENC
SHLHSSSHSNNNSNGSCTDVSSVVKPFNRSKSNIETNFTSQPKIISTTNA
AIAVSVKSKTLANLQDGHHNNQQHHHHHHNHHSDRGQADGGSNQQDSDFD
EFSSQDEDDEPQQPQQQPQPLQSQQQQQQPLLQNPTINGQVQTQHFYQNA
QELQKGQKNGSVPILGRCKALYSYTPKLYDELELSPGDIIEVHAKQDDGW
WLGALRNHIGIFPATYVEECAASFLDH
BO30745.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42388-PC | 768 | CG42388-PC | 98..768 | 1..671 | 3492 | 100 | Plus |
| CG42388-PF | 671 | CG42388-PF | 1..671 | 1..671 | 3492 | 100 | Plus |
| CG42388-PD | 675 | CG42388-PD | 7..675 | 3..671 | 3471 | 99.7 | Plus |
| CG42388-PG | 1225 | CG42388-PG | 559..1225 | 5..671 | 3468 | 99.9 | Plus |
| CG42388-PE | 1225 | CG42388-PE | 559..1225 | 5..671 | 3468 | 99.9 | Plus |
