BO30746.complete Sequence
2023 bp assembled on 2012-04-30
GenBank Submission: KX799450
> BO30746.complete
GAAGTTATCAGTCGACATGGATGCTAACAAAGCGGCAGAAACGGCAGCCA
AAGAAAATGCCGCCGATAAGGTAAGCGATGTGGAAAATGCATCGGTTACT
GCGGGGGTGGCGAAAGCCGTGGGGGCACAGCCGGAAAGGGGCTCCAAAGA
TGCAGCCGAATCCCCCGCCGCTGTCGACGCCTCTGCCTCTGCCGCCACTG
ATGACGTCGCTGATAAAAAAGCCAAAGGAGACTCAACGGCTGTTTCAAAT
ACCGAATCGGATGCAGCTGCAGCGGACAAAAAGGAGAAATCCCCCTCGCC
GGTAATAAAGAAGTCCAACAATAAGGATGCTAAAAAGGAGGACAACTCCG
AAAAGGACGAGGAGAACTCGGAAGACGGCGATGAGCCAGAAGATGAGGCT
GATGAGAAAGCTAGCGATGAAGAGAGCGAGAAGAAGAAACCGAAATTAGA
TGCAGAGGACAAGATAAAGGATGCCACTGATGAGTCCAAGCCAAAATCGG
GAGCCGATAAGCCCAAGAAACCTGAGCCCAAGGCCAAGAATGGCAAGGTG
GCTAAGGAGGAGGACGACGACGAAGAGGACGAGGATGATGAGGATGCCGA
AGATGACGATGGAGACGAGAACGATGGCCTGGACAAGAACAACGAGGTGG
CCGAGGATGATGAGAATGTCGTCGCTCTCGCCGAGATTGATCGCATTAAT
GAGAATATCAACAAGACTCGTGTAGATGGTCTGCAAACATTGCATGCAAT
CTGCTTTGGCGCCCAAGGCAAGAACAATGTGGTCAAGAAGAACTTGCGAT
CCTTTGCCGGTTTCGAGTTTGCCAAGGATTCAGCGGAGTACAACAAAAAG
CTGGAGGCCATCAAAAAGGTGGATAATAAGGGCCTGCGCAGCATCTGCGA
GATCCTTACCCTCGATCGCAAGGGCAGCAAGAACGAGACTGTCCTTCGAG
TGCTCAAATTCCTAATGGAACCGGACGAGTCGCTTTGCTTGGAGCAGGGT
GATGAGGAGGAGGAGGAAGATGCCGAGGACGAGGATCTGGATGAAGATGA
GGAGGACCCGCCCAGTGAAGAGGACAAGAAGCGCAAGAGCGGAAAGTCTA
GCGGCGGCGCTGGCAGAGGCTCTGCACGCAATTCCACCGGACGTCCAAGG
CGCGCGACGGCAGGAAAGAAAATGTCCGCCTATGTAGATTTCTCCAGCTC
TGACGATAGCGAGCAGAAAGTTGCAGTTCCCAAAAGGAGACGAAATGATG
ACTCCGAGTCGGGCTCAGATTACAATCCTTCTGCCAATTCCGACTCTGAC
GGTGGTCGTGGTGGTGGTGCTGGTGCAGCAGGTCGCAAAGTCCCAAGCCG
CGGTGGACGCGGTCGTCCTGCGCGCAAAAGTCGCAGAAGAAACTCTGATT
CCGAGGAAGAAGAGGAATCGGAAGTTTCCGATGCCGATAGTGATGTCCCA
AAACGTAAACGTGGTTCCGTGGGTAAACGTGGACGACCGGCAGCTCCTGC
GTCAGCTGGACGAAGGGGTAGAGGACGAGGTGCAGCTTCCCGCAAGCGTA
AAGATTCAGATAGCGAAGATGAGGAGGTATCCGAGGATGAAGAGGAGGAG
GATGTCTCCGATTTTGCCAGCGATCAAAGCGAAGAGGAACGTCCCAAAAA
GAGCAAGAAGCCCATTACGCCTGCGAAAAATAGCAAAGCTAACAACAAGT
CAAAACCAGCTGGAAAGGCCGATAGTCGATCGAAAAAATCAAAGAAGGAA
TCGTCCGAGGAAGATGATGATGTCGATGACAAAGATGAATCCGACGAGGA
TGAGCCACTAACCAAAAAGGGCAAACAGGCATTCCCAACGGATGAACAAA
TACGCGGATATGTCAAAGAGATTCTGGATAAAGCCAATCTTGAGGAGATT
ACGATGAAAACCGTGTGCAAACAAGTTTATGCAAAATATCCAGACTTTGA
CCTAACAGACAAGAAAGACTTCATCAAGGCGACAGTGAAAGCGTTAATTG
CGACAGCAAGCTTTCTAGACCAT
BO30746.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:31:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dek-RE | 1992 | CG5935-PE | 1..1989 | 17..2005 | 9945 | 100 | Plus |
Dek-RA | 1992 | CG5935-PA | 1..1989 | 17..2005 | 9945 | 100 | Plus |
Dek-RC | 2004 | CG5935-PC | 15..2001 | 19..2005 | 9935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:31:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dek-RE | 3947 | CG5935-RE | 82..2070 | 17..2005 | 9945 | 100 | Plus |
Dek-RA | 2567 | CG5935-RA | 82..2070 | 17..2005 | 9945 | 100 | Plus |
Dek-RC | 2579 | CG5935-RC | 96..2082 | 19..2005 | 9935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:31:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16857631..16858114 | 265..748 | 2420 | 100 | Plus |
2R | 25286936 | 2R | 16858181..16858601 | 749..1169 | 2105 | 100 | Plus |
2R | 25286936 | 2R | 16856805..16857052 | 19..266 | 1240 | 100 | Plus |
2R | 25286936 | 2R | 16859061..16859250 | 1445..1634 | 950 | 100 | Plus |
2R | 25286936 | 2R | 16858827..16859002 | 1271..1446 | 880 | 100 | Plus |
2R | 25286936 | 2R | 16859632..16859789 | 1840..1997 | 775 | 99.4 | Plus |
2R | 25286936 | 2R | 16859452..16859575 | 1718..1841 | 620 | 100 | Plus |
2R | 25286936 | 2R | 16858664..16858764 | 1170..1270 | 505 | 100 | Plus |
2R | 25286936 | 2R | 16859313..16859397 | 1634..1718 | 425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:31:14 has no hits.
BO30746.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-30 10:04:04 Download gff for
BO30746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dek-RA | 81..2069 | 17..2007 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:16 Download gff for
BO30746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dek-RA | 82..2070 | 17..2007 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:05:55 Download gff for
BO30746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dek-RA | 82..2070 | 17..2007 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:05:55 Download gff for
BO30746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16859633..16859785 | 1841..1993 | 100 | -> | Plus |
2R | 16856803..16857052 | 17..266 | 99 | -> | Plus |
2R | 16857633..16858114 | 267..748 | 100 | -> | Plus |
2R | 16858181..16858601 | 749..1169 | 100 | -> | Plus |
2R | 16858664..16858764 | 1170..1270 | 100 | -> | Plus |
2R | 16858827..16859000 | 1271..1444 | 100 | -> | Plus |
2R | 16859061..16859249 | 1445..1633 | 100 | -> | Plus |
2R | 16859313..16859397 | 1634..1718 | 100 | -> | Plus |
2R | 16859453..16859574 | 1719..1840 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:16 Download gff for
BO30746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12746958..12747079 | 1719..1840 | 100 | -> | Plus |
arm_2R | 12747138..12747290 | 1841..1993 | 100 | -> | Plus |
arm_2R | 12744308..12744557 | 17..266 | 99 | -> | Plus |
arm_2R | 12745138..12745619 | 267..748 | 100 | -> | Plus |
arm_2R | 12745686..12746106 | 749..1169 | 100 | -> | Plus |
arm_2R | 12746169..12746269 | 1170..1270 | 100 | -> | Plus |
arm_2R | 12746332..12746505 | 1271..1444 | 100 | -> | Plus |
arm_2R | 12746566..12746754 | 1445..1633 | 100 | -> | Plus |
arm_2R | 12746818..12746902 | 1634..1718 | 100 | -> | Plus |
BO30746.pep Sequence
Translation from 16 to 2023
> BO30746.pep
MDANKAAETAAKENAADKVSDVENASVTAGVAKAVGAQPERGSKDAAESP
AAVDASASAATDDVADKKAKGDSTAVSNTESDAAAADKKEKSPSPVIKKS
NNKDAKKEDNSEKDEENSEDGDEPEDEADEKASDEESEKKKPKLDAEDKI
KDATDESKPKSGADKPKKPEPKAKNGKVAKEEDDDEEDEDDEDAEDDDGD
ENDGLDKNNEVAEDDENVVALAEIDRINENINKTRVDGLQTLHAICFGAQ
GKNNVVKKNLRSFAGFEFAKDSAEYNKKLEAIKKVDNKGLRSICEILTLD
RKGSKNETVLRVLKFLMEPDESLCLEQGDEEEEEDAEDEDLDEDEEDPPS
EEDKKRKSGKSSGGAGRGSARNSTGRPRRATAGKKMSAYVDFSSSDDSEQ
KVAVPKRRRNDDSESGSDYNPSANSDSDGGRGGGAGAAGRKVPSRGGRGR
PARKSRRRNSDSEEEEESEVSDADSDVPKRKRGSVGKRGRPAAPASAGRR
GRGRGAASRKRKDSDSEDEEVSEDEEEEDVSDFASDQSEEERPKKSKKPI
TPAKNSKANNKSKPAGKADSRSKKSKKESSEEDDDVDDKDESDEDEPLTK
KGKQAFPTDEQIRGYVKEILDKANLEEITMKTVCKQVYAKYPDFDLTDKK
DFIKATVKALIATASFLDH
BO30746.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:25:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dek-PE | 663 | CG5935-PE | 1..663 | 1..663 | 3365 | 100 | Plus |
Dek-PA | 663 | CG5935-PA | 1..663 | 1..663 | 3365 | 100 | Plus |
Dek-PC | 667 | CG5935-PC | 6..667 | 2..663 | 3360 | 100 | Plus |
Dek-PB | 669 | CG5935-PB | 8..669 | 2..663 | 3360 | 100 | Plus |
Dek-PD | 612 | CG5935-PD | 1..608 | 1..608 | 3086 | 100 | Plus |