Clone BO30746 Report

Search the DGRC for BO30746

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:307
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptDek-RA
Protein status:BO30746.pep: Imported from assembly
Sequenced Size:2023

Clone Sequence Records

BO30746.complete Sequence

2023 bp assembled on 2012-04-30

GenBank Submission: KX799450

> BO30746.complete
GAAGTTATCAGTCGACATGGATGCTAACAAAGCGGCAGAAACGGCAGCCA
AAGAAAATGCCGCCGATAAGGTAAGCGATGTGGAAAATGCATCGGTTACT
GCGGGGGTGGCGAAAGCCGTGGGGGCACAGCCGGAAAGGGGCTCCAAAGA
TGCAGCCGAATCCCCCGCCGCTGTCGACGCCTCTGCCTCTGCCGCCACTG
ATGACGTCGCTGATAAAAAAGCCAAAGGAGACTCAACGGCTGTTTCAAAT
ACCGAATCGGATGCAGCTGCAGCGGACAAAAAGGAGAAATCCCCCTCGCC
GGTAATAAAGAAGTCCAACAATAAGGATGCTAAAAAGGAGGACAACTCCG
AAAAGGACGAGGAGAACTCGGAAGACGGCGATGAGCCAGAAGATGAGGCT
GATGAGAAAGCTAGCGATGAAGAGAGCGAGAAGAAGAAACCGAAATTAGA
TGCAGAGGACAAGATAAAGGATGCCACTGATGAGTCCAAGCCAAAATCGG
GAGCCGATAAGCCCAAGAAACCTGAGCCCAAGGCCAAGAATGGCAAGGTG
GCTAAGGAGGAGGACGACGACGAAGAGGACGAGGATGATGAGGATGCCGA
AGATGACGATGGAGACGAGAACGATGGCCTGGACAAGAACAACGAGGTGG
CCGAGGATGATGAGAATGTCGTCGCTCTCGCCGAGATTGATCGCATTAAT
GAGAATATCAACAAGACTCGTGTAGATGGTCTGCAAACATTGCATGCAAT
CTGCTTTGGCGCCCAAGGCAAGAACAATGTGGTCAAGAAGAACTTGCGAT
CCTTTGCCGGTTTCGAGTTTGCCAAGGATTCAGCGGAGTACAACAAAAAG
CTGGAGGCCATCAAAAAGGTGGATAATAAGGGCCTGCGCAGCATCTGCGA
GATCCTTACCCTCGATCGCAAGGGCAGCAAGAACGAGACTGTCCTTCGAG
TGCTCAAATTCCTAATGGAACCGGACGAGTCGCTTTGCTTGGAGCAGGGT
GATGAGGAGGAGGAGGAAGATGCCGAGGACGAGGATCTGGATGAAGATGA
GGAGGACCCGCCCAGTGAAGAGGACAAGAAGCGCAAGAGCGGAAAGTCTA
GCGGCGGCGCTGGCAGAGGCTCTGCACGCAATTCCACCGGACGTCCAAGG
CGCGCGACGGCAGGAAAGAAAATGTCCGCCTATGTAGATTTCTCCAGCTC
TGACGATAGCGAGCAGAAAGTTGCAGTTCCCAAAAGGAGACGAAATGATG
ACTCCGAGTCGGGCTCAGATTACAATCCTTCTGCCAATTCCGACTCTGAC
GGTGGTCGTGGTGGTGGTGCTGGTGCAGCAGGTCGCAAAGTCCCAAGCCG
CGGTGGACGCGGTCGTCCTGCGCGCAAAAGTCGCAGAAGAAACTCTGATT
CCGAGGAAGAAGAGGAATCGGAAGTTTCCGATGCCGATAGTGATGTCCCA
AAACGTAAACGTGGTTCCGTGGGTAAACGTGGACGACCGGCAGCTCCTGC
GTCAGCTGGACGAAGGGGTAGAGGACGAGGTGCAGCTTCCCGCAAGCGTA
AAGATTCAGATAGCGAAGATGAGGAGGTATCCGAGGATGAAGAGGAGGAG
GATGTCTCCGATTTTGCCAGCGATCAAAGCGAAGAGGAACGTCCCAAAAA
GAGCAAGAAGCCCATTACGCCTGCGAAAAATAGCAAAGCTAACAACAAGT
CAAAACCAGCTGGAAAGGCCGATAGTCGATCGAAAAAATCAAAGAAGGAA
TCGTCCGAGGAAGATGATGATGTCGATGACAAAGATGAATCCGACGAGGA
TGAGCCACTAACCAAAAAGGGCAAACAGGCATTCCCAACGGATGAACAAA
TACGCGGATATGTCAAAGAGATTCTGGATAAAGCCAATCTTGAGGAGATT
ACGATGAAAACCGTGTGCAAACAAGTTTATGCAAAATATCCAGACTTTGA
CCTAACAGACAAGAAAGACTTCATCAAGGCGACAGTGAAAGCGTTAATTG
CGACAGCAAGCTTTCTAGACCAT

BO30746.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:31:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dek-RE 1992 CG5935-PE 1..1989 17..2005 9945 100 Plus
Dek-RA 1992 CG5935-PA 1..1989 17..2005 9945 100 Plus
Dek-RC 2004 CG5935-PC 15..2001 19..2005 9935 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:31:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dek-RE 3947 CG5935-RE 82..2070 17..2005 9945 100 Plus
Dek-RA 2567 CG5935-RA 82..2070 17..2005 9945 100 Plus
Dek-RC 2579 CG5935-RC 96..2082 19..2005 9935 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:31:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16857631..16858114 265..748 2420 100 Plus
2R 25286936 2R 16858181..16858601 749..1169 2105 100 Plus
2R 25286936 2R 16856805..16857052 19..266 1240 100 Plus
2R 25286936 2R 16859061..16859250 1445..1634 950 100 Plus
2R 25286936 2R 16858827..16859002 1271..1446 880 100 Plus
2R 25286936 2R 16859632..16859789 1840..1997 775 99.4 Plus
2R 25286936 2R 16859452..16859575 1718..1841 620 100 Plus
2R 25286936 2R 16858664..16858764 1170..1270 505 100 Plus
2R 25286936 2R 16859313..16859397 1634..1718 425 100 Plus
Blast to na_te.dros performed on 2014-11-28 12:31:14 has no hits.

BO30746.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-30 10:04:04 Download gff for BO30746.complete
Subject Subject Range Query Range Percent Splice Strand
Dek-RA 81..2069 17..2007 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:16 Download gff for BO30746.complete
Subject Subject Range Query Range Percent Splice Strand
Dek-RA 82..2070 17..2007 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:05:55 Download gff for BO30746.complete
Subject Subject Range Query Range Percent Splice Strand
Dek-RA 82..2070 17..2007 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:05:55 Download gff for BO30746.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16859633..16859785 1841..1993 100 -> Plus
2R 16856803..16857052 17..266 99 -> Plus
2R 16857633..16858114 267..748 100 -> Plus
2R 16858181..16858601 749..1169 100 -> Plus
2R 16858664..16858764 1170..1270 100 -> Plus
2R 16858827..16859000 1271..1444 100 -> Plus
2R 16859061..16859249 1445..1633 100 -> Plus
2R 16859313..16859397 1634..1718 100 -> Plus
2R 16859453..16859574 1719..1840 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:16 Download gff for BO30746.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12746958..12747079 1719..1840 100 -> Plus
arm_2R 12747138..12747290 1841..1993 100 -> Plus
arm_2R 12744308..12744557 17..266 99 -> Plus
arm_2R 12745138..12745619 267..748 100 -> Plus
arm_2R 12745686..12746106 749..1169 100 -> Plus
arm_2R 12746169..12746269 1170..1270 100 -> Plus
arm_2R 12746332..12746505 1271..1444 100 -> Plus
arm_2R 12746566..12746754 1445..1633 100 -> Plus
arm_2R 12746818..12746902 1634..1718 100 -> Plus

BO30746.pep Sequence

Translation from 16 to 2023

> BO30746.pep
MDANKAAETAAKENAADKVSDVENASVTAGVAKAVGAQPERGSKDAAESP
AAVDASASAATDDVADKKAKGDSTAVSNTESDAAAADKKEKSPSPVIKKS
NNKDAKKEDNSEKDEENSEDGDEPEDEADEKASDEESEKKKPKLDAEDKI
KDATDESKPKSGADKPKKPEPKAKNGKVAKEEDDDEEDEDDEDAEDDDGD
ENDGLDKNNEVAEDDENVVALAEIDRINENINKTRVDGLQTLHAICFGAQ
GKNNVVKKNLRSFAGFEFAKDSAEYNKKLEAIKKVDNKGLRSICEILTLD
RKGSKNETVLRVLKFLMEPDESLCLEQGDEEEEEDAEDEDLDEDEEDPPS
EEDKKRKSGKSSGGAGRGSARNSTGRPRRATAGKKMSAYVDFSSSDDSEQ
KVAVPKRRRNDDSESGSDYNPSANSDSDGGRGGGAGAAGRKVPSRGGRGR
PARKSRRRNSDSEEEEESEVSDADSDVPKRKRGSVGKRGRPAAPASAGRR
GRGRGAASRKRKDSDSEDEEVSEDEEEEDVSDFASDQSEEERPKKSKKPI
TPAKNSKANNKSKPAGKADSRSKKSKKESSEEDDDVDDKDESDEDEPLTK
KGKQAFPTDEQIRGYVKEILDKANLEEITMKTVCKQVYAKYPDFDLTDKK
DFIKATVKALIATASFLDH

BO30746.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:25:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dek-PE 663 CG5935-PE 1..663 1..663 3365 100 Plus
Dek-PA 663 CG5935-PA 1..663 1..663 3365 100 Plus
Dek-PC 667 CG5935-PC 6..667 2..663 3360 100 Plus
Dek-PB 669 CG5935-PB 8..669 2..663 3360 100 Plus
Dek-PD 612 CG5935-PD 1..608 1..608 3086 100 Plus