BO30750.complete Sequence
841 bp assembled on 2012-03-05
GenBank Submission: KX795803
> BO30750.complete
GAAGTTATCAGTCGACATGACCCAAAGGATTGAAAATGTAGTGAAAGGAC
TAGTGATGGTGGTTCTGGCTTTTATGGTGGCACAAACGGTGTCCGATTGC
AATGTCTGTCAATCAAATCAAGTGGCCTGCATCAACTCCACGTCCTTTTA
CTTGTGTTTTGGAGATGGAACTCCACATCGTGATCAGCTATACCATTGCT
TAGAAGGATTTGACTGCACCAATCTCACGGCGATTTGTGTTCAGAAGAGC
AGCCAGCGGCCTCCCAGTTGCGGGGATACCTCTCAATGTGGCCAATGTAG
TGCCAATCGGAATTATCTATTCGCGTGCCAGAGTCGTGGTATCTTTCAGA
TGTGCTATGGAGCCACTAGACCCACTGGGCAATTTGGTTACTGCCCCACG
GGTACGGTTTGTGATGCCAGCAGCACTGCGATTTGTGTGCCTGAGGTCGC
GGGTCAAACGCTGACCTGTGACATAAATGACGAACTGGTGGACACCACCA
CTGCAGCGTCCGTGACCACCGAAACTACTGGCGGTACCACTGAAAGTAGC
ACTGAGAGCACAACTGAAAGCAGCACCGATTCAACTGTAACCACCGAGAC
GCCCACTACAGTGACGCCTCTAACTCCTGCCCAGATGTGTGCCCAAAGGA
ATGCCACTGGTCTTTTTCCCGTCATTCCTGCGGATCCCTATTGCCAGCGC
TACATTAGTTGTTACTTTCAAAAGAACGTTCTTATCAAATCTGCCGAATA
TAACTGTCCCACAGATTCCTGGTTTGTTGCTCAAACTCAGAGTTGCGTCT
ACGTAAATCCCGGCTACTGTCTTGCAAGCTTTCTAGACCAT
BO30750.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:20:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34427-RB | 810 | CG34427-PB | 1..807 | 17..823 | 4035 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:20:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34427-RB | 865 | CG34427-RB | 16..822 | 17..823 | 4035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:20:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8805043..8805579 | 163..699 | 2685 | 100 | Plus |
| 3L | 28110227 | 3L | 8805645..8805769 | 699..823 | 625 | 100 | Plus |
| 3L | 28110227 | 3L | 8804878..8804984 | 58..164 | 535 | 100 | Plus |
| 3L | 28110227 | 3L | 8804779..8804822 | 17..60 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:20:02 has no hits.
BO30750.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:08 Download gff for
BO30750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34427-RB | 16..822 | 17..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:24 Download gff for
BO30750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34427-RB | 16..822 | 17..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:15:39 Download gff for
BO30750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34427-RB | 16..822 | 17..825 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:15:39 Download gff for
BO30750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8804779..8804820 | 17..58 | 100 | -> | Plus |
| 3L | 8804879..8804984 | 59..164 | 100 | -> | Plus |
| 3L | 8805045..8805579 | 165..699 | 100 | -> | Plus |
| 3L | 8805646..8805769 | 700..825 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:24 Download gff for
BO30750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8797879..8797920 | 17..58 | 100 | -> | Plus |
| arm_3L | 8797979..8798084 | 59..164 | 100 | -> | Plus |
| arm_3L | 8798145..8798679 | 165..699 | 100 | -> | Plus |
| arm_3L | 8798746..8798869 | 700..825 | 98 | | Plus |
BO30750.pep Sequence
Translation from 16 to 841
> BO30750.pep
MTQRIENVVKGLVMVVLAFMVAQTVSDCNVCQSNQVACINSTSFYLCFGD
GTPHRDQLYHCLEGFDCTNLTAICVQKSSQRPPSCGDTSQCGQCSANRNY
LFACQSRGIFQMCYGATRPTGQFGYCPTGTVCDASSTAICVPEVAGQTLT
CDINDELVDTTTAASVTTETTGGTTESSTESTTESSTDSTVTTETPTTVT
PLTPAQMCAQRNATGLFPVIPADPYCQRYISCYFQKNVLIKSAEYNCPTD
SWFVAQTQSCVYVNPGYCLASFLDH
BO30750.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:41:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34427-PB | 269 | CG34427-PB | 1..269 | 1..269 | 1460 | 100 | Plus |
| CG14958-PA | 145 | CG14958-PA | 6..145 | 11..154 | 359 | 46.5 | Plus |
| CG34426-PA | 296 | CG34426-PA | 1..289 | 12..267 | 252 | 30.2 | Plus |
| CG13312-PA | 342 | CG13312-PA | 14..244 | 12..268 | 216 | 26.5 | Plus |
| CG13308-PB | 233 | CG13308-PB | 12..221 | 15..268 | 212 | 28.5 | Plus |
