Clone BO30751 Report

Search the DGRC for BO30751

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:307
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptOr43b-RA
Protein status:BO30751.pep: Imported from assembly
Sequenced Size:1243

Clone Sequence Records

BO30751.complete Sequence

1243 bp assembled on 2012-03-05

GenBank Submission: KX796011

> BO30751.complete
GAAGTTATCAGTCGACATGTTCGGACACTTTAAGCTCGTCTATCCGGCTC
CTATATCGGAGCCCATACAGTCTAGGGATTCGAATGCATACATGATGGAG
ACGCTGCGAAATTCGGGCTTGAATTTGAAGAACGATTTCGGTATAGGCCG
CAAGATTTGGAGGGTGTTTTCGTTCACCTACAATATGGTGATACTTCCCG
TAAGTTTCCCAATCAACTATGTGATACATCTGGCGGAGTTCCCGCCGGAG
CTGCTGCTGCAATCCCTGCAACTGTGCCTCAACACTTGGTGCTTCGCTCT
GAAGTTCTTCACTCTGATCGTCTATACGCACCGCTTGGAGCTGGCCAACA
AGCACTTTGACGAATTGGATAAGTACTGCGTGAAGCCGGCGGAGAAGCGC
AAGGTTCGCGACATGGTGGCCACTATTACAAGACTGTACCTGACCTTCGT
CGTGGTCTACGTCCTCTACGCCACCTCCACGCTACTGGACGGACTACTGC
ACCACCGTGTTCCCTACAATACGTACTATCCGTTCATAAACTGGCGAGTC
GATCGGACCCAGATGTACATCCAGAGTTTTCTGGAGTACTTCACCGTGGG
TTATGCCATATATGTGGCCACCGCCACCGATTCCTACCCTGTGATTTACG
TGGCAGCCCTGCGAACTCATATTCTCTTGCTCAAGGACCGTATCATTTAC
TTGGGCGATCCCAGCAACGAGGGTAGCAGCGACCCGAGCTACATGTTTAA
ATCGTTGGTGGATTGTATCAAGGCACACAGAACCATGCTAAATTTTTGTG
ATGCCATTCAACCAATCATCTCTGGCACGATATTTGCCCAATTCATCATA
TGCGGATCGATCCTGGGCATAATTATGATCAACATGGTATTGTTCGCTGA
TCAATCGACCCGATTCGGCATAGTCATCTACGTTATGGCCGTCCTTCTGC
AGACTTTTCCGCTTTGCTTCTACTGCAACGCCATCGTGGACGACTGCAAA
GAACTGGCCCACGCACTTTTCCATTCCGCCTGGTGGGTGCAGGACAAGCG
ATACCAGCGGACTGTCATCCAGTTCCTGCAGAAACTGCAGCAGCCCATGA
CCTTCACCGCCATGAACATATTTAACATTAATTTGGCCACTAACATCAAT
GTAGCCAAGTTCGCCTTCACCGTGTACGCCATCGCGAGCGGTATGAACCT
GGACCAAAAGTTAAGCATTAAGGAAGCAAGCTTTCTAGACCAT

BO30751.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
Or43b-RA 1212 CG17853-PA 1..1209 17..1225 6045 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:20:18
Subject Length Description Subject Range Query Range Score Percent Strand
Or43b-RA 1412 CG17853-RA 62..1270 17..1225 6045 100 Plus
Cul1-RB 3886 CG1877-RB 3419..3779 1153..793 1805 100 Minus
Cul1-RB 3886 CG1877-RB 3284..3358 1225..1151 375 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7921768..7922543 792..17 3880 100 Minus
2R 25286936 2R 7921112..7921472 1153..793 1805 100 Minus
2R 25286936 2R 7920977..7921051 1225..1151 375 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:20:16 has no hits.

BO30751.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:09 Download gff for BO30751.complete
Subject Subject Range Query Range Percent Splice Strand
Or43b-RA 67..1270 22..1227 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:29 Download gff for BO30751.complete
Subject Subject Range Query Range Percent Splice Strand
Or43b-RA 67..1270 22..1227 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:15:42 Download gff for BO30751.complete
Subject Subject Range Query Range Percent Splice Strand
Or43b-RA 67..1270 22..1227 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:15:42 Download gff for BO30751.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7920975..7921051 1151..1227 97 <- Minus
2R 7921115..7921472 793..1150 100 <- Minus
2R 7921768..7922538 22..792 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:29 Download gff for BO30751.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3808480..3808556 1151..1227 97 <- Minus
arm_2R 3808620..3808977 793..1150 100 <- Minus
arm_2R 3809273..3810043 22..792 100   Minus

BO30751.pep Sequence

Translation from 16 to 1243

> BO30751.pep
MFGHFKLVYPAPISEPIQSRDSNAYMMETLRNSGLNLKNDFGIGRKIWRV
FSFTYNMVILPVSFPINYVIHLAEFPPELLLQSLQLCLNTWCFALKFFTL
IVYTHRLELANKHFDELDKYCVKPAEKRKVRDMVATITRLYLTFVVVYVL
YATSTLLDGLLHHRVPYNTYYPFINWRVDRTQMYIQSFLEYFTVGYAIYV
ATATDSYPVIYVAALRTHILLLKDRIIYLGDPSNEGSSDPSYMFKSLVDC
IKAHRTMLNFCDAIQPIISGTIFAQFIICGSILGIIMINMVLFADQSTRF
GIVIYVMAVLLQTFPLCFYCNAIVDDCKELAHALFHSAWWVQDKRYQRTV
IQFLQKLQQPMTFTAMNIFNINLATNINVAKFAFTVYAIASGMNLDQKLS
IKEASFLDH

BO30751.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:41:34
Subject Length Description Subject Range Query Range Score Percent Strand
Or43b-PA 403 CG17853-PA 1..403 1..403 2113 100 Plus
Or42a-PA 406 CG17250-PA 7..403 5..403 753 36.8 Plus
Or42b-PA 399 CG12754-PA 3..395 5..398 699 36.5 Plus
Or59b-PA 398 CG3569-PA 4..396 5..398 679 34.5 Plus
Or22b-PA 397 CG4231-PA 6..395 5..398 632 34.3 Plus