BO30756.complete Sequence
481 bp assembled on 2012-03-05
GenBank Submission: KX799914
> BO30756.complete
GAAGTTATCAGTCGACATGACCTCCCAAGAAACGCAGACTGAGGGTGAAC
GTAGGAGGGTAACTCTTCCATCTTCGACACCAGATAAAGGTACACCATCC
AAAAAAGGCAGCGAGGAGCCCAACCGAATTTCGAACACAGAGTTCCAAAA
AAGAGTAACATCGGACAGAAGCGATGAGCCGGTCTTCAGCTGCCAATTCG
AAGTGTTCGGCATTGTGCAAGGCGTTTCATTTCGAATGTACACCTTGCGA
AGAGCTCAAAAGCTGGGAGTCCGGGGTTGGTGCAAAAACACCAACGAGAA
TACGGTGAAGGGCGAAATTCAAGCACACCGACATTCCTTTGAGTCCATGC
GCCTCTGGCTAAAGCACACCGGCAGCCCCACCAGTCGAATTGACAAATGC
ATTTTCAGTGAGACTACAGAACTTTCAGAATTCACGTTCACTAACTTCTC
CATAGTGGTGGATGCAAGCTTTCTAGACCAT
BO30756.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:21:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11052-RD | 450 | CG11052-PD | 1..447 | 17..463 | 2235 | 100 | Plus |
CG11052-RC | 450 | CG11052-PC | 1..447 | 17..463 | 2235 | 100 | Plus |
CG11052-RB | 450 | CG11052-PB | 1..447 | 17..463 | 2235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:21:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11052-RD | 605 | CG11052-RD | 22..468 | 17..463 | 2235 | 100 | Plus |
CG11052-RC | 761 | CG11052-RC | 178..624 | 17..463 | 2235 | 100 | Plus |
CG11052-RB | 695 | CG11052-RB | 112..558 | 17..463 | 2235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:21:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8008846..8009051 | 222..17 | 1030 | 100 | Minus |
3R | 32079331 | 3R | 8008386..8008500 | 463..349 | 575 | 100 | Minus |
3R | 32079331 | 3R | 8008551..8008662 | 349..238 | 560 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:21:09 has no hits.
BO30756.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:10 Download gff for
BO30756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11052-RA | 1..447 | 17..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:38 Download gff for
BO30756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11052-RB | 112..558 | 17..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:16:07 Download gff for
BO30756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11052-RB | 112..558 | 17..465 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:16:07 Download gff for
BO30756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8008384..8008500 | 349..465 | 98 | <- | Minus |
3R | 8008552..8008661 | 239..348 | 100 | <- | Minus |
3R | 8008776..8008792 | 222..238 | 100 | <- | Minus |
3R | 8008847..8009051 | 17..221 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:38 Download gff for
BO30756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3834106..3834222 | 349..465 | 98 | <- | Minus |
arm_3R | 3834274..3834383 | 239..348 | 100 | <- | Minus |
arm_3R | 3834498..3834514 | 222..238 | 100 | <- | Minus |
arm_3R | 3834569..3834773 | 17..221 | 100 | | Minus |
BO30756.pep Sequence
Translation from 16 to 481
> BO30756.pep
MTSQETQTEGERRRVTLPSSTPDKGTPSKKGSEEPNRISNTEFQKRVTSD
RSDEPVFSCQFEVFGIVQGVSFRMYTLRRAQKLGVRGWCKNTNENTVKGE
IQAHRHSFESMRLWLKHTGSPTSRIDKCIFSETTELSEFTFTNFSIVVDA
SFLDH
BO30756.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:41:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11052-PD | 149 | CG11052-PD | 1..149 | 1..149 | 781 | 100 | Plus |
CG11052-PC | 149 | CG11052-PC | 1..149 | 1..149 | 781 | 100 | Plus |
CG11052-PB | 149 | CG11052-PB | 1..149 | 1..149 | 781 | 100 | Plus |
CG11052-PA | 149 | CG11052-PA | 1..149 | 1..149 | 781 | 100 | Plus |
CG34161-PC | 125 | CG34161-PC | 6..123 | 29..146 | 243 | 39.8 | Plus |