Clone BO30758 Report

Search the DGRC for BO30758

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:307
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG34021-RA
Protein status:BO30758.pep: Imported from assembly
Sequenced Size:517

Clone Sequence Records

BO30758.complete Sequence

517 bp assembled on 2012-03-05

GenBank Submission: KX799945

> BO30758.complete
GAAGTTATCAGTCGACATGGATGTCACGAAAACATCAAGCGCTGAGGAAA
CCGAAAACACGGAAAATACTAGTCATGCTAAAAACATTAACGAAAACGTA
TCAAAATTTTATGAAACTATTGGAAATATTTCCCGAAATATGCGCAAGGA
CGATTGGACATATCTACAACGCCATCCAGAGATCCGAGCCATAATTCGGG
TCATTACAGCCGAGGCGGTTAAGGCAAAGCCATCGAATATCTACCAATTT
ACAGCCAATTTATTTGGAAGCGAAAGAGACGAGGAGATGGTAGAAAAGAT
AAACAAGCAACTTAAGTGGTTGGAAGAGCAGTTGCGAGGGGGTACGTGGA
ATCCTGACGAAGGATGTGCCCCGTTTCCAGAATCCAGCGAGACTTCTTCG
GAAACTAAATGCCAAACTAATTTTAATACCACTGCGAGTTTCAACATACC
CGAAAAGCAAGTTTGCCCTGAAAATTATAAGCCAGATTGCAAGAAATGTG
CAAGCTTTCTAGACCAT

BO30758.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG34021-RA 486 CG34021-PA 1..483 17..499 2415 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG34021-RA 760 CG34021-RA 98..580 17..499 2415 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12336987..12337268 17..298 1410 100 Plus
2R 25286936 2R 12337336..12337538 297..499 1015 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:18:50 has no hits.

BO30758.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:05 Download gff for BO30758.complete
Subject Subject Range Query Range Percent Splice Strand
CG34021-RA 6..488 17..501 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:14 Download gff for BO30758.complete
Subject Subject Range Query Range Percent Splice Strand
CG34021-RA 98..580 17..501 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:15:14 Download gff for BO30758.complete
Subject Subject Range Query Range Percent Splice Strand
CG34021-RA 98..580 17..501 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:15:14 Download gff for BO30758.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12337338..12337538 299..501 99   Plus
2R 12336987..12337268 17..298 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:14 Download gff for BO30758.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8224492..8224773 17..298 100 -> Plus
arm_2R 8224843..8225043 299..501 99   Plus

BO30758.pep Sequence

Translation from 16 to 517

> BO30758.pep
MDVTKTSSAEETENTENTSHAKNINENVSKFYETIGNISRNMRKDDWTYL
QRHPEIRAIIRVITAEAVKAKPSNIYQFTANLFGSERDEEMVEKINKQLK
WLEEQLRGGTWNPDEGCAPFPESSETSSETKCQTNFNTTASFNIPEKQVC
PENYKPDCKKCASFLDH

BO30758.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:41:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG34021-PA 161 CG34021-PA 1..161 1..161 863 100 Plus
CG34012-PA 158 CG34012-PA 24..124 30..128 199 42.6 Plus