BO30760.complete Sequence
2038 bp assembled on 2012-04-30
GenBank Submission: KX799572
> BO30760.complete
GAAGTTATCAGTCGACATGTCCGAAGAAATGGAAATTACTCCTATTACCG
GAATGGATGAAGTGTCCGAAAAAACTGCGGAGAAAGTCTTTGCTCCAATG
TTCGAAGCAGAAATGTCCGAGAAAATGGATATAACTCCTGTTACCGGAAT
GGATGAAGTGTCCGAAAAATCTGCGGAGAAAGTCTTTGCTCCAATGTTCG
AAGCAGAAATGTCCGAGGAAATGGAAATAACTCCTGTTACCGGAATGGAT
GAAGTGTCCGAAAATTATGAGGAGAAGGGCATCGCGCCAATATTCAAAGC
ACATATGTCCGAGGATACGGAAAATACTCCTGTTACCGGAATGGGAGAAG
TGTCTCAAACTTATGAGGAGAACGCAATTGCGCCAATGTCTGAAATATGC
GCATCAGGTGACCCAGTATCTCCAATGGATGGAGTAGCCCAGGAAGAGAA
CACATTTGCCTCCATCCCAGATGGTATAACCCGACTCAAGGACATTCTTG
CTACGCAGACATTCCTTGTCCAGAGAAATGAAACTGTTGTTCCCAGAAAT
GAAATGTCCCAGATGATATCACCGTTGGTCGAAATATCACAAAACGAACA
AAATATCAACGATCCTTCCGTGAATGAGAATCCACAAATGATCATGGATA
CGAGCACTTTTTCCACGAACGATGCTTCCACTACCAATGTCGTCTATGTG
GAACAGGAGCCAACATCGGTGGTGATGGTGGAGCAACCAAACACAATCAT
CGAGCTGGTGGATTATTATGTGCCACCAGCGTCCTTGAACAACAGGACAA
TCCGCCCGTTTTTCCCCATCCCAGTGCCCATGTACCCCGAATCCTCGCCG
GAACCCCCCGCCCCCAAGCCGGCGACAAAGGGTAAGCGTGGCCGGAAGCC
AGGTCCCAAACCTAAGCCGCGAGCAACCAAGCGTCGTCGCCCGCCGACGC
CTCCTCCACTGCCGCCGGTACCGAACTTCCTGGCACACGTCATCAATCCG
CTGGAGAATGAAATATATCCCAAGGTCATTGTCCAGCCGGTCTATCAGCC
CTGGGTGCTGCGCAGTGATGTGGCTCCTAAGCCGCCGCCACCCAAAGTGG
CAGTCAAGGAGGCGCCGATTCCCGTCAGCCGTCCGGTGACCAACCCCCCC
AGCCGTTCGCGGCGCGTGCTGATCAGCGCCCATCTGCGCGAGAAACTGCG
ACTCTTTGGTCCGGATGTGACCATCTCGCTGATCGACGACCGGGTATCAC
CGCACTTCAAGGCGGTGAGAAGGGAACCCGATGGCAGCCAGCGTCAAATA
TTATTCACCGCCCCACAGCTGCTCTCCTTTACCGCCGCCCACTTTGGCAA
TTGGCCGCAGATGGTGCCCATCCAGATGCTGATGATGAAGCCTTCGCCGG
CCATGTTGTCCCATTACTTTCCCGGACCCATGGGTCAAACTTTGGTCAAG
AAATGGTTTGCCGATCAGCAGCCGCTCGATAAGGAGCCATCATTGCCCTT
CAAGATGCCCATCGGCAGGCCACCGAAGCCCAGCAAATCCACTACAAGGC
CCAGTAAAACATATTTACATCCTGGCAAGCCCCAAGTATCCAAGCAATTT
GCAGCTCCAGCTCCCCCTGCAGTGCCTGCTCCTCGTCCAGCTGCTACATT
TGCTCCACCACCAGGTGATGCTCCTACTTCACATCCAGCTGGTGATCCGG
CTCCAGAATCCACTCCAACTCCGGCTCCGGAATCCAATCCAGATCCGGCT
CAAACTCCCACTCTGGCTCCCACTCCAGCTCCGCCAGTTGCGCCTACTCC
AGCACCTACTGTGGCCTCTAGCCCTACGGATCCATTTGATGAGAGCATGT
TTCCACCAATCATTCTGCCCGCTATCCTCAAGCGTTCATCCCAGGAGAGG
CTGCGCAAATCTATAATGGCCAAGCGGATCAAGGCCATGAAGGAGGCTGC
AGCTGCGGCTGCGGCTGCGGCAGAAAGTGCCAAGTTGAGTCTGAACAATG
ATATGCCGGCGAAAGAGTTTGCAAGCTTTCTAGACCAT
BO30760.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:31:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14190-RA | 2007 | CG14190-PA | 1..2004 | 17..2020 | 10020 | 100 | Plus |
| CG14190-RA | 2007 | CG14190-PA | 1..275 | 113..387 | 880 | 88 | Plus |
| CG14190-RA | 2007 | CG14190-PA | 97..371 | 17..291 | 880 | 88 | Plus |
| CG14190-RA | 2007 | CG14190-PA | 1..181 | 209..389 | 380 | 80.7 | Plus |
| CG14190-RA | 2007 | CG14190-PA | 193..373 | 17..197 | 380 | 80.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:31:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14190-RA | 2489 | CG14190-RA | 111..2114 | 17..2020 | 10020 | 100 | Plus |
| CG14190-RA | 2489 | CG14190-RA | 109..385 | 111..387 | 890 | 88.1 | Plus |
| CG14190-RA | 2489 | CG14190-RA | 207..481 | 17..291 | 880 | 88 | Plus |
| CG14190-RA | 2489 | CG14190-RA | 109..291 | 207..389 | 390 | 80.9 | Plus |
| CG14190-RA | 2489 | CG14190-RA | 303..483 | 17..197 | 380 | 80.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:31:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19065414..19067417 | 17..2020 | 10020 | 100 | Plus |
| X | 23542271 | X | 19065412..19065688 | 111..387 | 890 | 88.1 | Plus |
| X | 23542271 | X | 19065510..19065784 | 17..291 | 880 | 88 | Plus |
| X | 23542271 | X | 19065412..19065594 | 207..389 | 390 | 80.9 | Plus |
| X | 23542271 | X | 19065606..19065786 | 17..197 | 380 | 80.7 | Plus |
Blast to na_te.dros performed 2014-11-28 12:31:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osvaldo | 1543 | Osvaldo OSV 1543bp | 1163..1236 | 700..770 | 128 | 67.6 | Plus |
BO30760.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-30 10:04:05 Download gff for
BO30760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14190-RA | 1..2004 | 17..2022 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:21 Download gff for
BO30760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14190-RA | 111..2114 | 17..2022 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:06:01 Download gff for
BO30760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14190-RA | 111..2114 | 17..2022 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:06:01 Download gff for
BO30760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19065414..19067417 | 17..2022 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:21 Download gff for
BO30760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18959447..18961450 | 17..2022 | 99 | | Plus |
BO30760.pep Sequence
Translation from 16 to 2038
> BO30760.pep
MSEEMEITPITGMDEVSEKTAEKVFAPMFEAEMSEKMDITPVTGMDEVSE
KSAEKVFAPMFEAEMSEEMEITPVTGMDEVSENYEEKGIAPIFKAHMSED
TENTPVTGMGEVSQTYEENAIAPMSEICASGDPVSPMDGVAQEENTFASI
PDGITRLKDILATQTFLVQRNETVVPRNEMSQMISPLVEISQNEQNINDP
SVNENPQMIMDTSTFSTNDASTTNVVYVEQEPTSVVMVEQPNTIIELVDY
YVPPASLNNRTIRPFFPIPVPMYPESSPEPPAPKPATKGKRGRKPGPKPK
PRATKRRRPPTPPPLPPVPNFLAHVINPLENEIYPKVIVQPVYQPWVLRS
DVAPKPPPPKVAVKEAPIPVSRPVTNPPSRSRRVLISAHLREKLRLFGPD
VTISLIDDRVSPHFKAVRREPDGSQRQILFTAPQLLSFTAAHFGNWPQMV
PIQMLMMKPSPAMLSHYFPGPMGQTLVKKWFADQQPLDKEPSLPFKMPIG
RPPKPSKSTTRPSKTYLHPGKPQVSKQFAAPAPPAVPAPRPAATFAPPPG
DAPTSHPAGDPAPESTPTPAPESNPDPAQTPTLAPTPAPPVAPTPAPTVA
SSPTDPFDESMFPPIILPAILKRSSQERLRKSIMAKRIKAMKEAAAAAAA
AAESAKLSLNNDMPAKEFASFLDH
BO30760.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:25:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14190-PA | 668 | CG14190-PA | 1..668 | 1..668 | 3492 | 100 | Plus |
| CG15021-PA | 420 | CG15021-PA | 75..382 | 269..606 | 210 | 28.9 | Plus |
| CG13731-PB | 792 | CG13731-PB | 36..332 | 280..598 | 187 | 27.6 | Plus |
| CG10953-PB | 278 | CG10953-PB | 60..226 | 447..619 | 179 | 33 | Plus |
| CG10953-PA | 278 | CG10953-PA | 60..226 | 447..619 | 179 | 33 | Plus |
| CG15021-PA | 420 | CG15021-PA | 157..287 | 485..614 | 164 | 32.6 | Plus |
| CG10953-PB | 278 | CG10953-PB | 27..255 | 316..609 | 158 | 26.4 | Plus |
