Clone BO30762 Report

Search the DGRC for BO30762

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:307
Well:62
Vector:pDNR-Dual
Associated Gene/TranscriptCG32832-RA
Protein status:BO30762.pep: Imported from assembly
Sequenced Size:454

Clone Sequence Records

BO30762.complete Sequence

454 bp assembled on 2012-03-05

GenBank Submission: KX797570

> BO30762.complete
GAAGTTATCAGTCGACATGTCTAAAGGCACGGGACCCTTGTCTAAGTTGT
ACAATATTACCATCAGTACTATTGATAAATTTGTTCCAGGCGCAGTTCAG
CCACTTTGGCAATCCCCAGCTGGACCCCGTACTGTGTTTTTTTGGGCACC
AGCGTTTAAATGGTCCTTGGTGCTGGCTGGGCTGAGCGATACGCTAAGTC
GTCCTCCTGCCAATATATCGCTGAATCAATGCGGCTCCTTGGCAGTCACG
GGCTTAATTTGGTCTCGCTACTCAGTGGTTATCACACCCAAGAACTACAA
TCTTCTGGCCGTCAACATAGCCGTCTTTCTCATCCAGGGTTATCTAATGG
TCAAGCACCTAAGGTGGCGCAGCGAGAACTCTCGGAATGCGGTGTTCAAT
CATTCGCACTACCCAATCAAATCAGGAGATGATTGGGCAAGCTTTCTAGA
CCAT

BO30762.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:22:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG32832-RB 423 CG32832-PB 1..420 17..436 2100 100 Plus
CG32832-RA 423 CG32832-PA 1..420 17..436 2100 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:22:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG32832-RB 772 CG32832-RB 75..494 17..436 2100 100 Plus
CG32832-RA 675 CG32832-RA 75..494 17..436 2100 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:22:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16878604..16878877 436..163 1370 100 Minus
2L 23513712 2L 16879110..16879216 123..17 535 100 Minus
2L 23513712 2L 16879017..16879058 163..122 210 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:22:03 has no hits.

BO30762.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:12 Download gff for BO30762.complete
Subject Subject Range Query Range Percent Splice Strand
CG32832-RA 60..479 17..438 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:51 Download gff for BO30762.complete
Subject Subject Range Query Range Percent Splice Strand
CG32832-RA 75..494 17..438 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:16:29 Download gff for BO30762.complete
Subject Subject Range Query Range Percent Splice Strand
CG32832-RA 75..494 17..438 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:16:29 Download gff for BO30762.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16878600..16878876 164..438 99 <- Minus
2L 16879017..16879057 123..163 100 <- Minus
2L 16879111..16879216 17..122 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:51 Download gff for BO30762.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16878600..16878876 164..438 99 <- Minus
arm_2L 16879017..16879057 123..163 100 <- Minus
arm_2L 16879111..16879216 17..122 100   Minus

BO30762.pep Sequence

Translation from 16 to 454

> BO30762.pep
MSKGTGPLSKLYNITISTIDKFVPGAVQPLWQSPAGPRTVFFWAPAFKWS
LVLAGLSDTLSRPPANISLNQCGSLAVTGLIWSRYSVVITPKNYNLLAVN
IAVFLIQGYLMVKHLRWRSENSRNAVFNHSHYPIKSGDDWASFLDH

BO30762.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG32832-PB 140 CG32832-PB 1..140 1..140 747 100 Plus
CG32832-PA 140 CG32832-PA 1..140 1..140 747 100 Plus
CG9399-PD 154 CG9399-PD 22..126 2..107 338 61.3 Plus
CG9399-PA 154 CG9399-PA 22..126 2..107 338 61.3 Plus
CG9399-PB 154 CG9399-PB 22..126 2..107 338 61.3 Plus