BO30762.complete Sequence
454 bp assembled on 2012-03-05
GenBank Submission: KX797570
> BO30762.complete
GAAGTTATCAGTCGACATGTCTAAAGGCACGGGACCCTTGTCTAAGTTGT
ACAATATTACCATCAGTACTATTGATAAATTTGTTCCAGGCGCAGTTCAG
CCACTTTGGCAATCCCCAGCTGGACCCCGTACTGTGTTTTTTTGGGCACC
AGCGTTTAAATGGTCCTTGGTGCTGGCTGGGCTGAGCGATACGCTAAGTC
GTCCTCCTGCCAATATATCGCTGAATCAATGCGGCTCCTTGGCAGTCACG
GGCTTAATTTGGTCTCGCTACTCAGTGGTTATCACACCCAAGAACTACAA
TCTTCTGGCCGTCAACATAGCCGTCTTTCTCATCCAGGGTTATCTAATGG
TCAAGCACCTAAGGTGGCGCAGCGAGAACTCTCGGAATGCGGTGTTCAAT
CATTCGCACTACCCAATCAAATCAGGAGATGATTGGGCAAGCTTTCTAGA
CCAT
BO30762.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:22:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32832-RB | 423 | CG32832-PB | 1..420 | 17..436 | 2100 | 100 | Plus |
CG32832-RA | 423 | CG32832-PA | 1..420 | 17..436 | 2100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:22:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32832-RB | 772 | CG32832-RB | 75..494 | 17..436 | 2100 | 100 | Plus |
CG32832-RA | 675 | CG32832-RA | 75..494 | 17..436 | 2100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:22:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16878604..16878877 | 436..163 | 1370 | 100 | Minus |
2L | 23513712 | 2L | 16879110..16879216 | 123..17 | 535 | 100 | Minus |
2L | 23513712 | 2L | 16879017..16879058 | 163..122 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:22:03 has no hits.
BO30762.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:12 Download gff for
BO30762.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32832-RA | 60..479 | 17..438 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:51 Download gff for
BO30762.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32832-RA | 75..494 | 17..438 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:16:29 Download gff for
BO30762.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32832-RA | 75..494 | 17..438 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:16:29 Download gff for
BO30762.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16878600..16878876 | 164..438 | 99 | <- | Minus |
2L | 16879017..16879057 | 123..163 | 100 | <- | Minus |
2L | 16879111..16879216 | 17..122 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:51 Download gff for
BO30762.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16878600..16878876 | 164..438 | 99 | <- | Minus |
arm_2L | 16879017..16879057 | 123..163 | 100 | <- | Minus |
arm_2L | 16879111..16879216 | 17..122 | 100 | | Minus |
BO30762.pep Sequence
Translation from 16 to 454
> BO30762.pep
MSKGTGPLSKLYNITISTIDKFVPGAVQPLWQSPAGPRTVFFWAPAFKWS
LVLAGLSDTLSRPPANISLNQCGSLAVTGLIWSRYSVVITPKNYNLLAVN
IAVFLIQGYLMVKHLRWRSENSRNAVFNHSHYPIKSGDDWASFLDH
BO30762.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32832-PB | 140 | CG32832-PB | 1..140 | 1..140 | 747 | 100 | Plus |
CG32832-PA | 140 | CG32832-PA | 1..140 | 1..140 | 747 | 100 | Plus |
CG9399-PD | 154 | CG9399-PD | 22..126 | 2..107 | 338 | 61.3 | Plus |
CG9399-PA | 154 | CG9399-PA | 22..126 | 2..107 | 338 | 61.3 | Plus |
CG9399-PB | 154 | CG9399-PB | 22..126 | 2..107 | 338 | 61.3 | Plus |