BO30764.complete Sequence
493 bp assembled on 2012-03-05
GenBank Submission: KX794668
> BO30764.complete
GAAGTTATCAGTCGACATGTCTAAAAGCAACGCATCTGTGGAAGGTCCCC
GTTTTGAGGAGCACCTAGTCTGTCCATTCGATGGATTACATCGCATATTG
CCGCTCGATATGAAGACGCACGTGTTGCAGTGCGCCAAGAACTTTCCTTT
GGAAAAGTTGGTGCACTGTCCATATAACTGCGGTCAAATACACTCGGTTG
CCGAAATGGAGAATCATATCAATGATTGTCCAGACCGAGCATATTTGGAG
CGCAACAATGTGCCTAGTGATGAGTTGCCTTCTTTGGCACAGCGACCGCG
TGGTGTTGAGGTGGAGAGCGAAGAGGATTGGGATGCCGAACCGCCATCTC
AGACGTACAACCCTAGTCTTCACTGCGAGAGGAGCATGGTTATCCGTACC
ATACATGGAGCTACACGATCCGCTCGTCGAGAATTCCGCAAACGCGAGCA
AAAGCGATTAAATGATTTAAATCCAGCAAGCTTTCTAGACCAT
BO30764.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:22:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34283-RA | 462 | CG34283-PA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:22:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34283-RA | 567 | CG34283-RA | 69..527 | 17..475 | 2295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:22:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18722007..18722272 | 475..210 | 1330 | 100 | Minus |
| 3R | 32079331 | 3R | 18722328..18722522 | 211..17 | 975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:22:17 has no hits.
BO30764.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:13 Download gff for
BO30764.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34283-RA | 1..459 | 17..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:55 Download gff for
BO30764.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34283-RA | 1..459 | 17..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:16:35 Download gff for
BO30764.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34283-RA | 69..527 | 17..477 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:16:35 Download gff for
BO30764.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18722005..18722270 | 212..477 | 99 | <- | Minus |
| 3R | 18722328..18722522 | 17..211 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:55 Download gff for
BO30764.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14547727..14547992 | 212..477 | 99 | <- | Minus |
| arm_3R | 14548050..14548244 | 17..211 | 100 | | Minus |
BO30764.pep Sequence
Translation from 16 to 493
> BO30764.pep
MSKSNASVEGPRFEEHLVCPFDGLHRILPLDMKTHVLQCAKNFPLEKLVH
CPYNCGQIHSVAEMENHINDCPDRAYLERNNVPSDELPSLAQRPRGVEVE
SEEDWDAEPPSQTYNPSLHCERSMVIRTIHGATRSARREFRKREQKRLND
LNPASFLDH
BO30764.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34283-PA | 153 | CG34283-PA | 1..153 | 1..153 | 832 | 100 | Plus |
| CG32625-PA | 144 | CG32625-PA | 5..141 | 11..152 | 297 | 38 | Plus |
| arx-PA | 167 | CG3893-PA | 4..131 | 19..147 | 170 | 26.2 | Plus |
