Clone BO30765 Report

Search the DGRC for BO30765

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:307
Well:65
Vector:pDNR-Dual
Associated Gene/TranscriptSfp84E-RA
Protein status:BO30765.pep: Imported from assembly
Sequenced Size:514

Clone Sequence Records

BO30765.complete Sequence

514 bp assembled on 2012-03-05

GenBank Submission: KX794469

> BO30765.complete
GAAGTTATCAGTCGACATGCGTCACTTTACCGTGCTAGTATCCTGCATCC
TGATAGTTATATTGCCATGCGTGTTAGGGGCTCACAGGACAGCTCTCAAG
AGTCATTATAGAAGCTTTGTGAAACCAAAGCAGAATGTCATACGGGCTAG
AACCAATCAAACAACACAACTTACATTAGGAGACTATACGGAAAACTTTT
ATAAACACTGCATGGATATTTTCAAAGAGAAAAACTTGGTTGGTAAAGTG
ATCCATGGCATGATCAGTGGAATTTTAGACAGGCTCAATGAAGTGTGCCT
CGACAAGCCCATTCACCCACTTATCCACAAAGTTTTCACGGAAATCCTTC
TCTGTGGCGGAAGCATGTCGGATGCAATCGATAGCGTCATTGACATATTA
TTTGGAAATTTGGAAAGAAATTGCAGGGAGAGGCCTGGATTCAATAGCTA
TTATATTTTAACCAGTGCGGAAAACGAAATAGTTGAATCAAAAGGTGCAA
GCTTTCTAGACCAT

BO30765.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:22:40
Subject Length Description Subject Range Query Range Score Percent Strand
Sfp84E-RA 483 CG42484-PA 1..480 17..496 2400 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:22:41
Subject Length Description Subject Range Query Range Score Percent Strand
Sfp84E-RA 685 CG42484-RA 30..509 17..496 2400 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:22:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7979764..7980241 496..19 2390 100 Minus
Blast to na_te.dros performed 2014-11-28 08:22:39
Subject Length Description Subject Range Query Range Score Percent Strand
Rt1b 5171 Rt1b RT1B 5150bp 3972..4068 73..169 125 58.8 Plus

BO30765.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:13 Download gff for BO30765.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp84E-RA 30..509 17..498 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:00 Download gff for BO30765.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp84E-RA 30..509 17..498 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:16:43 Download gff for BO30765.complete
Subject Subject Range Query Range Percent Splice Strand
Sfp84E-RA 30..509 17..498 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:16:43 Download gff for BO30765.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7979762..7980242 17..498 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:00 Download gff for BO30765.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3805484..3805964 17..498 99   Minus

BO30765.pep Sequence

Translation from 16 to 514

> BO30765.pep
MRHFTVLVSCILIVILPCVLGAHRTALKSHYRSFVKPKQNVIRARTNQTT
QLTLGDYTENFYKHCMDIFKEKNLVGKVIHGMISGILDRLNEVCLDKPIH
PLIHKVFTEILLCGGSMSDAIDSVIDILFGNLERNCRERPGFNSYYILTS
AENEIVESKGASFLDH

BO30765.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:17
Subject Length Description Subject Range Query Range Score Percent Strand
Sfp84E-PA 160 CG42484-PA 1..160 1..160 838 100 Plus