BO30771.complete Sequence
1057 bp assembled on 2012-03-05
GenBank Submission: KX793804
> BO30771.complete
GAAGTTATCAGTCGACATGCAGCCAGGATTTACGGAGCGAATGCGAGACC
ATCTAATGCTCATTGAAATTTACGATTATGCTGCGAAATTATTAAACAAT
ATGACCGCCAGAGGAGTCAGGAATTCAGTGGGAAAATCAGCCGAGAGCCG
TACTAAGGAATCAACAGGGAAATTGGGCAGCCTGCTTGGCCGCACACTGG
CCAAAGTGGCCAAAGTGGCCCGCTCCAATCCCGCCCAGCACGTGACCAAT
CTGCCCGTTTCCGCACTCCTGCTCCAGGCCCTCGACGTGGCGGACGTGGC
CCGCGGACAGGGAATCGATTATCCCATCACTAGCACCACCGGGACCACCT
TCAACATTATCACCACCACCACCACCACCACCACCACCACCACGGGCAGT
GACCCAACGGATGTGCTCGGCAGTCAGCCGCCGGCGTTCTCATTTCCCGC
CAACGTCACTGGAGCACCGGGAAGTGCGGGGAATGCGAACGCATACCTGC
CCGCGGGCAATCTCAGCGGTTTCATCGAATCCTCAACAACGGCGGTGATG
AGCACACTGCCCATACCCACCAGCACCATGGCCACGCTCCAGGCCCAAAC
GGTGGCCACTTTCATCGCCGCCACCGGCAGCAAGAATCGCCCAACGACCA
TCGTTGTCTACCCAACGGTTTCACCCGAATCGATTGTCATCCCGATCGTC
TCCTGTATCTTCGGCTTCCCCATCCTGGCGCTTCTGGTGATCTGTTGCCT
TCGAAGGAGGGCCAAGTTGGCCAGGGAGAGGGATAGGAGGCGTAACTACG
ATATGCAGGACCATGCCGTCAGCCTGGTCAGATTTAGTCCAATACATAGG
CTTAATTACCGATCGTCGCGAGCTATCAGTCTACGTCCTGAACGAAGCCT
AAGCCAGGGCTTCACCTCTCTGGAGCTGGACACTGTGCTGGAGGAGCGCT
GCAGCGACGTGGAGCAAACGCAGACGGAGATGTTCAACGCGGAGTCACCG
ATGGACACCACCTCCTACAAGATGTCCTTCTCTTCGAGCGCAAGCTTTCT
AGACCAT
BO30771.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:21:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43740-RC | 1491 | CG43740-PC | 1..984 | 56..1039 | 4920 | 100 | Plus |
| CG43740-RA | 987 | CG43740-PA | 1..984 | 56..1039 | 4920 | 100 | Plus |
| CG43740-RB | 819 | CG43740-PB | 1..771 | 56..826 | 3855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:21:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43740-RC | 1878 | CG43740-RC | 101..1117 | 23..1039 | 5085 | 100 | Plus |
| CG43740-RA | 1878 | CG43740-RA | 101..1117 | 23..1039 | 5085 | 100 | Plus |
| CG43740-RB | 1850 | CG43740-RB | 101..904 | 23..826 | 4020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:21:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10335799..10336451 | 16..668 | 3265 | 100 | Plus |
| X | 23542271 | X | 10343870..10344056 | 668..854 | 935 | 100 | Plus |
| X | 23542271 | X | 10346849..10347033 | 855..1039 | 925 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:21:41 has no hits.
BO30771.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:11 Download gff for
BO30771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15307-RA | 1..939 | 101..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:46 Download gff for
BO30771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43740-RA | 94..1117 | 17..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:16:20 Download gff for
BO30771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43740-RA | 94..1117 | 17..1041 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:16:20 Download gff for
BO30771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10335800..10336451 | 17..668 | 100 | -> | Plus |
| X | 10343871..10344056 | 669..854 | 100 | -> | Plus |
| X | 10346849..10347033 | 855..1041 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:46 Download gff for
BO30771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10229833..10230484 | 17..668 | 100 | -> | Plus |
| arm_X | 10237904..10238089 | 669..854 | 100 | -> | Plus |
| arm_X | 10240882..10241066 | 855..1041 | 98 | | Plus |
BO30771.pep Sequence
Translation from 16 to 1057
> BO30771.pep
MQPGFTERMRDHLMLIEIYDYAAKLLNNMTARGVRNSVGKSAESRTKEST
GKLGSLLGRTLAKVAKVARSNPAQHVTNLPVSALLLQALDVADVARGQGI
DYPITSTTGTTFNIITTTTTTTTTTTGSDPTDVLGSQPPAFSFPANVTGA
PGSAGNANAYLPAGNLSGFIESSTTAVMSTLPIPTSTMATLQAQTVATFI
AATGSKNRPTTIVVYPTVSPESIVIPIVSCIFGFPILALLVICCLRRRAK
LARERDRRRNYDMQDHAVSLVRFSPIHRLNYRSSRAISLRPERSLSQGFT
SLELDTVLEERCSDVEQTQTEMFNAESPMDTTSYKMSFSSSASFLDH
BO30771.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43740-PA | 328 | CG43740-PA | 1..328 | 14..341 | 1638 | 100 | Plus |
| CG43740-PC | 496 | CG43740-PC | 1..328 | 14..341 | 1638 | 100 | Plus |
| CG43740-PB | 272 | CG43740-PB | 1..258 | 14..271 | 1286 | 99.6 | Plus |
