BO30772.complete Sequence
2269 bp assembled on 2012-04-30
GenBank Submission: KX798285
> BO30772.complete
GAAGTTATCAGTCGACATGGCGGAAGTGAAGCGTCGGGACCCAAACCGCC
CGCCCGGACACTACTTGTGCGGCATGGCCAACTGGCATCCGCCCTGGCTG
CAGAAGTACGCCACCACCAAGATGTTCATGGGCGTCTACGGGCTGCTCGG
CACCATTCAGGCGATGTCCTACATGTACTTCATCGTCACTCTAACCACGC
TGGAAAAGCGCTTCAAGATTCCCAGCCAAACGACAGGCATAATTCTAAGC
GGCAATGAAATCTCGCAGATCATGCTCTCGCTTATCCTCTCCTACATCGG
TGGTCAGCGGAATCGTCCCCGTTGGATTGCCTGGGGCATTGTCTTCTGCG
GCCTGTCCTGCTACATACTCGTCCTGCCTCATTTCATCTACGGAGCTGGT
CACGAGGTGCTGCAGTTCACCAAGGAGTACCAGGATAGTCTATTGAATGG
GACTACTGGCTCGGATCACTCCTTTCAAAATATCAGCTCAGTGAAGACCG
AGCGACTCTGTGGAGTGGACAAAACCGAGGATGACTGTGACGATCTGTTC
TCCTATGTGCCACTTGTGCTCATCTTTCTCTCGCAGTTCGTTCTGGGCGT
GGGCAACACCTTGTACTACTCCCTGGGACAGACCTACCTCGACGACAACA
CCAAGAAGACGAACACTCCGCTCATGCTGGCGGTGGCCATGGCACTCAGG
ATGATTGGACCAGTCGTGGGATTCTTTTTCGGTTTCATATCGCTTAACAC
CTTCATCGATCCAACCAAGACGCCGTTGATCGACAGCAAGGACCCCCGCT
GGCTAGGTGCCTGGTGGCTCGGCTGGGTGATCCTGGGCACCCTCATGTGC
CTCTTCTCCGGTCTTATCGGACTGTTTCCCAAGCAATTGCCCAAAGTAAA
CGCATCAAGGACAAACTCCCATTTGCCGTTGGCACTCCGTCAGACGAAGG
AGGAGCTTAAGCGGGAGGAGAACCTCTCACTGAGCAGCCGCTTTTCCTCC
AACGCCGCTCTGGATACCATTGGAGCAGCGGCCGGTGCCAATGCAGATCT
GCCCAAGCTAAAGGACTTTCCACGTGCCCTTATGAGACTGCTGCGCAACA
AGCTGCTGATCTTCAACATCCTCTCGGCGGTCTTTTATATCCTGGGTGCT
TCCGGCTTCATGACCTTTCTCACCAAGTACATGGAGGTGCAGTTCCACAA
GGATGCGCAAAGCGCCACGATTATCGTTGGACCCATATCCATCATGGGCA
TGGTCGTGGGTCTGATTGGCTCGGGTATGGTGCTTTCCAAAAAGAAACCC
AGCGTCAGCAAGGTGCTCATGTGGAACGTGATCGTTGGTGGGATCTCCAT
CTTGGGACAGATCTCATACGCTTTTCTCTACTGCCCGAATACCTTTTCCA
TGACGCAAGCGGGACAGCTTAACCTGACGAGCAACTGCAACATGAACTGC
TCCTGCGAGGGCATCAGTTACACACCCGTCTGCCACGAACCAACGGACAC
CACCTTCTTCTCGGCCTGTCATGCGGGTTGCCGTGGATACAATGCCACAT
CCAAGTTGTACGAGGACTGCAGTTGTGTGGTTAATGATCCAGCGCCAAAG
AGTGCGGCACAGCGTCTGCTGAATCTATTGCAACCCACTCCGGAACCCGA
ACTCGATACCACCACGTACTTTGATGAGTATCTGAGCGGAGTGCCATTGC
TGGACGACAACGGTGACTTCGATGATCAGCTGCTGTCCAGGACCAGGAGA
TCCACTTCCGATTCAGTGATCCGACCGGGCATTTGTACCAAAAACTGCAA
CTGGAGTTTCTGGGCCTTTTCCATTACCTCGATGATCGTTAGTTGGTTCG
GTTCATCCGGTCGCGTGGGCAACGTATTGGTCAACTATCGAGCCGTGGCC
CACGAGGACAAGTCCTTCGCCCAGGGGCTGGCGCTGATGATGATTAGCCT
TCTGGCCCTCATACCGGGACCCATCATATTCGGCCGCCTCATCGACTCCA
CGTGCCTGGTGTGGACAAAGACCTGCAATGGCAATGGCAACTGTCAGTTG
TACGACCAGACCCGTTTCCGTTACTCCCTCAACTTTTTATCCTGCCTGCT
CACCTTTATGGGACTCCTCTTCGATTACCTCGTTTGGTACTACGGACGCA
ACCTGGACATTTATGGCGACAAGGAGGCCAAGGAGGAGGAGCGTGCCAAC
AGAAAAGACCAGCCCATTACTCCGCTCCTGGCCAAGAAATCCGAACAGGA
GGCAAGCTTTCTAGACCAT
BO30772.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:31:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp33Ea-RB | 2238 | CG5427-PB | 1..2235 | 17..2251 | 11175 | 100 | Plus |
| Oatp33Ea-RA | 2238 | CG5427-PA | 1..2235 | 17..2251 | 11175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:31:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp33Ea-RB | 3025 | CG5427-RB | 400..2634 | 17..2251 | 11175 | 100 | Plus |
| Oatp33Ea-RA | 2939 | CG5427-RA | 388..2622 | 17..2251 | 11175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:31:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12443011..12443754 | 1222..479 | 3720 | 100 | Minus |
| 2L | 23513712 | 2L | 12442009..12442688 | 2096..1417 | 3400 | 100 | Minus |
| 2L | 23513712 | 2L | 12443814..12444057 | 478..235 | 1220 | 100 | Minus |
| 2L | 23513712 | 2L | 12444168..12444388 | 237..17 | 1105 | 100 | Minus |
| 2L | 23513712 | 2L | 12442755..12442949 | 1417..1223 | 975 | 100 | Minus |
| 2L | 23513712 | 2L | 12441792..12441946 | 2251..2097 | 775 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:31:46 has no hits.
BO30772.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-30 10:04:06 Download gff for
BO30772.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp33Ea-RA | 386..2620 | 17..2253 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:25 Download gff for
BO30772.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp33Ea-RA | 388..2622 | 17..2253 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:06:08 Download gff for
BO30772.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp33Ea-RA | 388..2622 | 17..2253 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:06:08 Download gff for
BO30772.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12442756..12442949 | 1223..1416 | 100 | <- | Minus |
| 2L | 12441790..12441946 | 2097..2253 | 98 | <- | Minus |
| 2L | 12442009..12442688 | 1417..2096 | 100 | <- | Minus |
| 2L | 12443011..12443754 | 479..1222 | 100 | <- | Minus |
| 2L | 12443814..12444055 | 237..478 | 100 | <- | Minus |
| 2L | 12444169..12444388 | 17..236 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:25 Download gff for
BO30772.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12442756..12442949 | 1223..1416 | 100 | <- | Minus |
| arm_2L | 12441790..12441946 | 2097..2253 | 98 | <- | Minus |
| arm_2L | 12442009..12442688 | 1417..2096 | 100 | <- | Minus |
| arm_2L | 12443011..12443754 | 479..1222 | 100 | <- | Minus |
| arm_2L | 12443814..12444055 | 237..478 | 100 | <- | Minus |
| arm_2L | 12444169..12444388 | 17..236 | 100 | | Minus |
BO30772.pep Sequence
Translation from 16 to 2269
> BO30772.pep
MAEVKRRDPNRPPGHYLCGMANWHPPWLQKYATTKMFMGVYGLLGTIQAM
SYMYFIVTLTTLEKRFKIPSQTTGIILSGNEISQIMLSLILSYIGGQRNR
PRWIAWGIVFCGLSCYILVLPHFIYGAGHEVLQFTKEYQDSLLNGTTGSD
HSFQNISSVKTERLCGVDKTEDDCDDLFSYVPLVLIFLSQFVLGVGNTLY
YSLGQTYLDDNTKKTNTPLMLAVAMALRMIGPVVGFFFGFISLNTFIDPT
KTPLIDSKDPRWLGAWWLGWVILGTLMCLFSGLIGLFPKQLPKVNASRTN
SHLPLALRQTKEELKREENLSLSSRFSSNAALDTIGAAAGANADLPKLKD
FPRALMRLLRNKLLIFNILSAVFYILGASGFMTFLTKYMEVQFHKDAQSA
TIIVGPISIMGMVVGLIGSGMVLSKKKPSVSKVLMWNVIVGGISILGQIS
YAFLYCPNTFSMTQAGQLNLTSNCNMNCSCEGISYTPVCHEPTDTTFFSA
CHAGCRGYNATSKLYEDCSCVVNDPAPKSAAQRLLNLLQPTPEPELDTTT
YFDEYLSGVPLLDDNGDFDDQLLSRTRRSTSDSVIRPGICTKNCNWSFWA
FSITSMIVSWFGSSGRVGNVLVNYRAVAHEDKSFAQGLALMMISLLALIP
GPIIFGRLIDSTCLVWTKTCNGNGNCQLYDQTRFRYSLNFLSCLLTFMGL
LFDYLVWYYGRNLDIYGDKEAKEEERANRKDQPITPLLAKKSEQEASFLD
H
BO30772.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:25:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp33Ea-PB | 745 | CG5427-PB | 1..745 | 1..745 | 3941 | 100 | Plus |
| Oatp33Ea-PA | 745 | CG5427-PA | 1..745 | 1..745 | 3941 | 100 | Plus |
| Oatp58Dc-PC | 789 | CG3380-PC | 94..771 | 18..725 | 1244 | 36.4 | Plus |
| Oatp58Dc-PB | 789 | CG3380-PB | 94..771 | 18..725 | 1244 | 36.4 | Plus |
| Oatp58Dc-PA | 789 | CG3380-PA | 94..771 | 18..725 | 1244 | 36.4 | Plus |
