BO30776.complete Sequence
1159 bp assembled on 2012-03-05
GenBank Submission: KX798942
> BO30776.complete
GAAGTTATCAGTCGACATGGCCGAGAACGCGGGCTTCATCAGTGTGCCCT
GGGGGCAGCACAAGCTGGGCGCGATGTACAATACGCCGTTTCCCTCGATA
AGCCGCCCGAAGTGCATCGGTGTGTGCAGCATAAACGCTAGCCGGGAATT
TGTGGACGACGCCAGCTGCGCCAGCTACTTGGCTGGCCAACCGTGGCCAC
CGCTGCCGTTCGATCTTAACGGGGGTATAGAGGATGTGATCCGTAAGCCC
GTCGAGAACGGCAAACGGGATCTGGAAATTATGCTGACCTACATTAAGCA
ACACCAGAAGGAGCTGCTCCGTCAGAGTAGCTCCGATGCGAGAAATCTAC
GCCTGGACAGCGACTTTGTAACACTGCGCGGTATTTTGCGGCAGATAATG
TGCCTGCAGTATGATAATCGCTCATTCCGCGTCAAGGCGACGCTCCTGAA
CGGCAACGTCTACATGTGCAAGGAGGAAACCCCAGAGCAGCAGCTGGAGA
ACGCGAACATGAGCAGGGCACAGCGGGTCATGTGCTCCTGGGGCTTCAAG
TTCGAGCAGTACCTGACCAGTGCCCAGGCGCAGGGAAAACCGGTGACCAA
TGTGCCGGTCAACGAGGCAGAGGAGTTCATGGGCGTGTACCGCACGAACC
TGGCCGGGATTTTGATGCTATACGGCGCCGAACTGGACTGTGTGGACAGC
AAGGAGCCAGTTGACTTCAAAGATTGCAGAGTGCTCGACTCATTGAAATT
CGTAGAGCTAAAGACCAGCGTCTTCAATATGAACCCTCACCAAATTCGCA
CCTTCAAATCGTTCAAGTCTGCCAACTGGTGGAGTCAGTCATTCCTGGTG
GGCATCACTACGCTCTACGTGGGACTCCGCGACACCAAGGGCATGCTGCA
GAGGATCGATGAGATCGATGTGGCAACACTGGCCCGCAACAAACCGTGGA
GTGCATCGGCAATGGCTTGGTACCTGGAACAGTTTCTGCGCAATCTTAAG
AAGCTGCTGGTGAACATTAACGATCCGTTTGCGGTGGTCCAGGTGACTTT
TTTAAATAAGCACGCCAGCTACGAAGTGCTGCGCGGTCCGGAACATCAAA
TCCTGCCCAACTGGTATCGAGATTTGCTCAAAACGCGCTCCGCAAGCTTT
CTAGACCAT
BO30776.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:00:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9125-RA | 1128 | CG9125-PA | 1..1125 | 17..1141 | 5625 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:00:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9125-RA | 1329 | CG9125-RA | 94..1218 | 17..1141 | 5625 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:00:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16802557..16803251 | 711..17 | 3475 | 100 | Minus |
| X | 23542271 | X | 16802040..16802469 | 1141..712 | 2150 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:00:35 has no hits.
BO30776.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:42 Download gff for
BO30776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9125-RA | 1..1125 | 17..1143 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:43 Download gff for
BO30776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9125-RA | 94..1218 | 17..1143 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:08:57 Download gff for
BO30776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9125-RA | 94..1218 | 17..1143 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:08:57 Download gff for
BO30776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16802038..16802469 | 712..1143 | 99 | <- | Minus |
| X | 16802557..16803251 | 17..711 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:43 Download gff for
BO30776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16696071..16696502 | 712..1143 | 99 | <- | Minus |
| arm_X | 16696590..16697284 | 17..711 | 100 | | Minus |
BO30776.pep Sequence
Translation from 16 to 1159
> BO30776.pep
MAENAGFISVPWGQHKLGAMYNTPFPSISRPKCIGVCSINASREFVDDAS
CASYLAGQPWPPLPFDLNGGIEDVIRKPVENGKRDLEIMLTYIKQHQKEL
LRQSSSDARNLRLDSDFVTLRGILRQIMCLQYDNRSFRVKATLLNGNVYM
CKEETPEQQLENANMSRAQRVMCSWGFKFEQYLTSAQAQGKPVTNVPVNE
AEEFMGVYRTNLAGILMLYGAELDCVDSKEPVDFKDCRVLDSLKFVELKT
SVFNMNPHQIRTFKSFKSANWWSQSFLVGITTLYVGLRDTKGMLQRIDEI
DVATLARNKPWSASAMAWYLEQFLRNLKKLLVNINDPFAVVQVTFLNKHA
SYEVLRGPEHQILPNWYRDLLKTRSASFLDH
BO30776.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9125-PA | 375 | CG9125-PA | 1..375 | 1..375 | 1977 | 100 | Plus |
| cuff-PA | 384 | CG13190-PA | 13..364 | 15..371 | 161 | 21.6 | Plus |
