BO30780.complete Sequence
796 bp assembled on 2012-03-05
GenBank Submission: KX794750
> BO30780.complete
GAAGTTATCAGTCGACATGTCACGATCTCCCTGCTGGATTTTCCTTTTAT
ATTTGGTCCTTATCATTTTCACTTTTACTTTCGCACAAAACTATTGCGAT
CCAGAACTGTGTCCCAGTGGAAGACACGTGGCCTGCCAAAACAGCGGTCG
CTTTGTGAGCGGTTGCAGCGGCGAGTTTGTCCAAGTGGATGCCCACATCC
CGCTGATTCTCCAGCTGCACAACGAACGCCGCAACCTGATCGCTGGCGGT
GGAGTTAGTGGCTTCCCCAGTGCCGTCCAAATGGCCACAATGTCCTGGGA
CACGACACTGGCCCAACTGGCCGCCTACAATGCGCTGCAGTGCCGCATGG
CGCACGACGAATGCCGCAACACGAACACGTATCGCTATGCCGGCCAGAAT
CTGAGCATTCTCTTCACCCGAAGTGTGGATGTGGCGGTCTTCCTGCGCCA
ACGGATCGCCGCCTGGTTCGATGAGAATCGGGATGCGACCAGTGGCGACA
TGGAGGACTATCAGATGCGCGGTGGACCAGCAATTGGCCACTTCACCACC
ATGGTCAACGAGCGAAATAACCGAGTGGGTTGTGCGATTGCTCGATTTAC
GGACGCCAACAATGTGCAGGCCACCCTGCTGGCTTGCAACTACGCGGTCA
CCAATGTGGTGAATAACCCGGTTTACAGGGCGGGAACCGCTGCCTCGGAA
TGCACTACAGGACGAAACTCCAACTATCCGAATCTCTGCTCGCCCAACGA
GGTGTACAACTATAATCAATGGTCGGGAGCAAGCTTTCTAGACCAT
BO30780.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:02:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32679-RA | 765 | CG32679-PA | 1..762 | 17..778 | 3810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:02:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32679-RA | 884 | CG32679-RA | 12..773 | 17..778 | 3810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:02:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10366818..10367197 | 528..149 | 1900 | 100 | Minus |
| X | 23542271 | X | 10366513..10366762 | 778..529 | 1250 | 100 | Minus |
| X | 23542271 | X | 10367330..10367461 | 148..17 | 660 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:02:16 has no hits.
BO30780.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:43 Download gff for
BO30780.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32679-RA | 1..762 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:52 Download gff for
BO30780.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32679-RA | 12..773 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:09:34 Download gff for
BO30780.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32679-RA | 12..773 | 17..780 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:09:34 Download gff for
BO30780.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10367330..10367461 | 17..148 | 100 | | Minus |
| X | 10366511..10366762 | 529..780 | 99 | <- | Minus |
| X | 10366818..10367197 | 149..528 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:52 Download gff for
BO30780.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10260544..10260795 | 529..780 | 99 | <- | Minus |
| arm_X | 10260851..10261230 | 149..528 | 100 | <- | Minus |
| arm_X | 10261363..10261494 | 17..148 | 100 | | Minus |
BO30780.pep Sequence
Translation from 16 to 796
> BO30780.pep
MSRSPCWIFLLYLVLIIFTFTFAQNYCDPELCPSGRHVACQNSGRFVSGC
SGEFVQVDAHIPLILQLHNERRNLIAGGGVSGFPSAVQMATMSWDTTLAQ
LAAYNALQCRMAHDECRNTNTYRYAGQNLSILFTRSVDVAVFLRQRIAAW
FDENRDATSGDMEDYQMRGGPAIGHFTTMVNERNNRVGCAIARFTDANNV
QATLLACNYAVTNVVNNPVYRAGTAASECTTGRNSNYPNLCSPNEVYNYN
QWSGASFLDH
BO30780.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32679-PA | 254 | CG32679-PA | 1..254 | 1..254 | 1368 | 100 | Plus |
| Ag5r2-PA | 254 | CG9540-PA | 5..254 | 10..252 | 465 | 38.2 | Plus |
| CG9822-PA | 263 | CG9822-PA | 12..259 | 14..250 | 436 | 40.6 | Plus |
| CG17974-PA | 259 | CG17974-PA | 5..258 | 8..250 | 422 | 38.2 | Plus |
| Ag5r-PC | 256 | CG9538-PC | 6..252 | 10..250 | 405 | 36.7 | Plus |
