Clone BO30781 Report

Search the DGRC for BO30781

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:307
Well:81
Vector:pDNR-Dual
Associated Gene/TranscriptCG13438-RA
Protein status:BO30781.pep: Imported from assembly
Sequenced Size:694

Clone Sequence Records

BO30781.complete Sequence

694 bp assembled on 2012-03-05

GenBank Submission: KX797941

> BO30781.complete
GAAGTTATCAGTCGACATGAAGTCGTTCGGGAACTTGACCTTTGGCCTAC
TCGTCATCCTTATAGCAAGCTTTACTGTCGGCCTAGAGGCTCGTCGCCTG
GCTTTGCGTCCATTGACAGGAAGGGAACTGAGAAGAGCTCTTAGGGAATC
CGGATTCGATGAGGATTCTGCAGCTGGAAGATCAGTGGCGTCGGCGCTGT
CCGGACTCAGTGGATTCGCCCTGGGCATCACAAAGGGCATTGGTGGCTCA
CTGCTGTTCGATGTGGTCACCTCGAATGTGACCATTGATTACATTACCAG
TCTGCTGAACTCCACTGCCTCATCGTCGACTTCAAGCAGCAGTGGAACTG
CACAGGAGATCTGTTTCAACAGTCGCAGTGCCGACGGTGAGGTGATTAAC
GGCAGGAGTAATGGCTTCAATGACATGGATGATGGAGCAGATCTCGACGG
CGAGTGGAGACAGACTACCAGTGGCACGGGCACGGGCTCTGTTACTGGCA
CTGGCACTGAGACAGGAACTACCACCTCCTCGTCTTCCAACGGCCTCACC
TGCATTGTCCTGAGCAAGGAGGGTTCCCGTCGCAGGCGCCAGTTGCGAAT
CCAACCAGGAACGTTGAGATCTGTTTATCCTAAAAGCCATCGGCAGACCC
TGAAAAAGTACCGCCGGCATAGGGTTGCAAGCTTTCTAGACCAT

BO30781.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:02:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG13438-RA 663 CG13438-PA 1..660 17..676 3300 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:02:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG13438-RA 834 CG13438-RA 42..701 17..676 3300 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:02:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20693019..20693606 89..676 2940 100 Plus
2R 25286936 2R 20692870..20692942 17..89 365 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:02:37 has no hits.

BO30781.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:44 Download gff for BO30781.complete
Subject Subject Range Query Range Percent Splice Strand
CG13438-RA 1..660 17..678 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:57 Download gff for BO30781.complete
Subject Subject Range Query Range Percent Splice Strand
CG13438-RA 42..701 17..678 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:09:42 Download gff for BO30781.complete
Subject Subject Range Query Range Percent Splice Strand
CG13438-RA 42..701 17..678 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:09:42 Download gff for BO30781.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20692870..20692942 17..89 100 -> Plus
2R 20693020..20693606 90..678 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:57 Download gff for BO30781.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16580375..16580447 17..89 100 -> Plus
arm_2R 16580525..16581111 90..678 99   Plus

BO30781.pep Sequence

Translation from 16 to 694

> BO30781.pep
MKSFGNLTFGLLVILIASFTVGLEARRLALRPLTGRELRRALRESGFDED
SAAGRSVASALSGLSGFALGITKGIGGSLLFDVVTSNVTIDYITSLLNST
ASSSTSSSSGTAQEICFNSRSADGEVINGRSNGFNDMDDGADLDGEWRQT
TSGTGTGSVTGTGTETGTTTSSSSNGLTCIVLSKEGSRRRRQLRIQPGTL
RSVYPKSHRQTLKKYRRHRVASFLDH

BO30781.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG13438-PA 220 CG13438-PA 1..220 1..220 1096 100 Plus