BO30782.complete Sequence
577 bp assembled on 2012-03-05
GenBank Submission: KX796949
> BO30782.complete
GAAGTTATCAGTCGACATGGCGCCCAATTTGACTTGTGTATGGATTACTC
TGCTGCAACTCATGAGCTTGGCTCTGGCCGATGTCTCACACCTGGATTAC
TCGATAGCACCCAGCACCCAGCTGGGTTACTATCACTATCCCGCTCCCAA
CAGGCCAGCCGTGCAGCGGAGCCAGAGGAACCAGTACCAACAGAACCAGC
AGTATCCCCAAGTGGCACGACAGTTTGCCGAGCCCGCCTTGGAGCATGCC
GCCTTCACCCAGGCTCTGACCAGCCAGGGTTACGTATTTGGAGCACCGTC
GTCTGCCCTCCAGGTGGCTCCCCCGGCACCACAGCCCCAGCAGGTGGCCA
GAGTATCATCTGCTGCGGGATCGGCCACAGGTCGTTCCATATCCTCCGCT
TCCGTGGATGCCAACTCGCTGAATCTCAAGCTGCCAGTGCCCTTTGGCAT
TGCTCCACTGAATGTGGCGCAACTTCCGCTGCAGGCTGGGGCACCATATG
CCAGTGTGCCCAGAACCACGGGGCTAACCTCCTATGGAACACCGCAGATC
CAGAGGCGCGCAAGCTTTCTAGACCAT
BO30782.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:59:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13046-RB | 546 | CG13046-PB | 1..543 | 17..559 | 2715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:59:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13046-RB | 781 | CG13046-RB | 101..643 | 17..559 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:59:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16287718..16288248 | 559..29 | 2655 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 07:59:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6845..6892 | 164..211 | 105 | 68.8 | Plus |
BO30782.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:38 Download gff for
BO30782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13046-RB | 1..543 | 17..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:29 Download gff for
BO30782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13046-RB | 101..643 | 17..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:08:30 Download gff for
BO30782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13046-RB | 101..643 | 17..561 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:08:30 Download gff for
BO30782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16287716..16288248 | 29..561 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:29 Download gff for
BO30782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16280816..16281348 | 29..561 | 99 | <- | Minus |
BO30782.pep Sequence
Translation from 16 to 577
> BO30782.pep
MAPNLTCVWITLLQLMSLALADVSHLDYSIAPSTQLGYYHYPAPNRPAVQ
RSQRNQYQQNQQYPQVARQFAEPALEHAAFTQALTSQGYVFGAPSSALQV
APPAPQPQQVARVSSAAGSATGRSISSASVDANSLNLKLPVPFGIAPLNV
AQLPLQAGAPYASVPRTTGLTSYGTPQIQRRASFLDH
BO30782.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13046-PB | 181 | CG13046-PB | 1..181 | 1..181 | 923 | 100 | Plus |