Clone BO30782 Report

Search the DGRC for BO30782

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:307
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG13046-RB
Protein status:BO30782.pep: Imported from assembly
Sequenced Size:577

Clone Sequence Records

BO30782.complete Sequence

577 bp assembled on 2012-03-05

GenBank Submission: KX796949

> BO30782.complete
GAAGTTATCAGTCGACATGGCGCCCAATTTGACTTGTGTATGGATTACTC
TGCTGCAACTCATGAGCTTGGCTCTGGCCGATGTCTCACACCTGGATTAC
TCGATAGCACCCAGCACCCAGCTGGGTTACTATCACTATCCCGCTCCCAA
CAGGCCAGCCGTGCAGCGGAGCCAGAGGAACCAGTACCAACAGAACCAGC
AGTATCCCCAAGTGGCACGACAGTTTGCCGAGCCCGCCTTGGAGCATGCC
GCCTTCACCCAGGCTCTGACCAGCCAGGGTTACGTATTTGGAGCACCGTC
GTCTGCCCTCCAGGTGGCTCCCCCGGCACCACAGCCCCAGCAGGTGGCCA
GAGTATCATCTGCTGCGGGATCGGCCACAGGTCGTTCCATATCCTCCGCT
TCCGTGGATGCCAACTCGCTGAATCTCAAGCTGCCAGTGCCCTTTGGCAT
TGCTCCACTGAATGTGGCGCAACTTCCGCTGCAGGCTGGGGCACCATATG
CCAGTGTGCCCAGAACCACGGGGCTAACCTCCTATGGAACACCGCAGATC
CAGAGGCGCGCAAGCTTTCTAGACCAT

BO30782.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:59:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG13046-RB 546 CG13046-PB 1..543 17..559 2715 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13046-RB 781 CG13046-RB 101..643 17..559 2715 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:59:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16287718..16288248 559..29 2655 100 Minus
Blast to na_te.dros performed 2014-11-28 07:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6845..6892 164..211 105 68.8 Plus

BO30782.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:38 Download gff for BO30782.complete
Subject Subject Range Query Range Percent Splice Strand
CG13046-RB 1..543 17..561 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:29 Download gff for BO30782.complete
Subject Subject Range Query Range Percent Splice Strand
CG13046-RB 101..643 17..561 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:08:30 Download gff for BO30782.complete
Subject Subject Range Query Range Percent Splice Strand
CG13046-RB 101..643 17..561 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:08:30 Download gff for BO30782.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16287716..16288248 29..561 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:29 Download gff for BO30782.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16280816..16281348 29..561 99 <- Minus

BO30782.pep Sequence

Translation from 16 to 577

> BO30782.pep
MAPNLTCVWITLLQLMSLALADVSHLDYSIAPSTQLGYYHYPAPNRPAVQ
RSQRNQYQQNQQYPQVARQFAEPALEHAAFTQALTSQGYVFGAPSSALQV
APPAPQPQQVARVSSAAGSATGRSISSASVDANSLNLKLPVPFGIAPLNV
AQLPLQAGAPYASVPRTTGLTSYGTPQIQRRASFLDH

BO30782.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13046-PB 181 CG13046-PB 1..181 1..181 923 100 Plus