BO30783.complete Sequence
859 bp assembled on 2012-03-05
GenBank Submission: KX799340
> BO30783.complete
GAAGTTATCAGTCGACATGGCATTCCGCTATCTCATCTCTCTGTGCGCCC
TGGTGGCCTGCGCCAATGCTGGTCTCTTGGCCAGCCATGTGGCCATTGCT
AATCCGTCGGTGGATGCCGTCGCCTCCACTCAGCAGAATGTGGTGAGGTC
CTTTGCCGGTACTGTTTCCAGCTACTCGAAGGCGGTGGACACCCCCTACT
CCAGTGTGAGGAAGAGCGACACGAGGATCCAGAACAATGTATACACTCCT
GCTATTAAGACGACCACTTATGGTGCTGCTCCTCTGTACACTCAGGCTAC
TCCCATTGTGTCCAAGACTCTGGTCCATGCTCCAGCTCCCGTTGTTGAGA
AGACTGTGTACGCTGCTGCTCCAGCTCCAGTTCTGGCCAAGACTGTTTAC
TCCGCTCCTGCTCCAGTTGTGGCCAAGCACGTTTATTCCGCTCCAGCTCA
GGTTTATGCTCCTGCCGCCCCAGTTGTGGCCAAGACCGTGTACTCTGCTC
CTGCTCCAGTTTACGCTGCTCCTGCTCCAGTTTATGCTGCACCCGCTCCA
GTTGTAGCCAAGACCGTGTACTCCGCACCAGCTCCAGTTCTGGCCAAGAC
CGTGTACTCTGCTCCAGCTCCAGTTTATGCTGCTTCCGCACCGGCTGTGG
CCAAGACTGTGTCCTATGCCGCCCCACTGGCCACCACCAATGTGAACCAT
GGACCAGCTGCCACCACCTACACCCACAATGCTCCAGCTCTGGGCGTCTC
CAGCTATGGAAGCTCCCAGACGGTTCACTATTCCCCCGCAGAGAGTGTGT
CGCACATGAGCTTCGATGGATTCGGAACCCACTGGGGTTTCGCAAGCTTT
CTAGACCAT
BO30783.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:59:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8541-RA | 828 | CG8541-PA | 1..825 | 17..841 | 4125 | 100 | Plus |
| CG8541-RA | 828 | CG8541-PA | 348..482 | 535..669 | 315 | 82.2 | Plus |
| CG8541-RA | 828 | CG8541-PA | 519..653 | 364..498 | 315 | 82.2 | Plus |
| CG8543-RA | 660 | CG8543-PA | 382..543 | 434..589 | 230 | 79 | Plus |
| CG8543-RA | 660 | CG8543-PA | 502..560 | 470..528 | 220 | 91.5 | Plus |
| CG8543-RA | 660 | CG8543-PA | 487..545 | 569..627 | 220 | 91.5 | Plus |
| CG8541-RA | 828 | CG8541-PA | 454..504 | 584..634 | 210 | 94.1 | Plus |
| CG8541-RA | 828 | CG8541-PA | 568..618 | 470..520 | 210 | 94.1 | Plus |
| CG8543-RA | 660 | CG8543-PA | 133..269 | 113..249 | 205 | 76.6 | Plus |
| CG8541-RA | 828 | CG8541-PA | 424..495 | 518..589 | 195 | 84.7 | Plus |
| CG8541-RA | 828 | CG8541-PA | 502..573 | 440..511 | 195 | 84.7 | Plus |
| CG8543-RA | 660 | CG8543-PA | 493..543 | 368..418 | 195 | 92.2 | Plus |
| CG8541-RA | 828 | CG8541-PA | 559..609 | 539..589 | 180 | 90.2 | Plus |
| CG8541-RA | 828 | CG8541-PA | 562..609 | 371..418 | 180 | 91.7 | Plus |
| CG8541-RA | 828 | CG8541-PA | 355..402 | 578..625 | 180 | 91.7 | Plus |
| CG8541-RA | 828 | CG8541-PA | 523..573 | 575..625 | 180 | 90.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:59:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8541-RA | 956 | CG8541-RA | 50..876 | 15..841 | 4135 | 100 | Plus |
| CG8541-RA | 956 | CG8541-RA | 399..533 | 535..669 | 315 | 82.2 | Plus |
| CG8541-RA | 956 | CG8541-RA | 570..704 | 364..498 | 315 | 82.2 | Plus |
| CG8543-RA | 801 | CG8543-RA | 449..610 | 434..589 | 230 | 79 | Plus |
| CG8543-RA | 801 | CG8543-RA | 554..612 | 569..627 | 220 | 91.5 | Plus |
| CG8543-RA | 801 | CG8543-RA | 569..627 | 470..528 | 220 | 91.5 | Plus |
| CG8541-RA | 956 | CG8541-RA | 505..555 | 584..634 | 210 | 94.1 | Plus |
| CG8541-RA | 956 | CG8541-RA | 619..669 | 470..520 | 210 | 94.1 | Plus |
| CG8543-RA | 801 | CG8543-RA | 200..336 | 113..249 | 205 | 76.6 | Plus |
| CG8541-RA | 956 | CG8541-RA | 475..546 | 518..589 | 195 | 84.7 | Plus |
| CG8541-RA | 956 | CG8541-RA | 553..624 | 440..511 | 195 | 84.7 | Plus |
| CG8543-RA | 801 | CG8543-RA | 560..610 | 368..418 | 195 | 92.2 | Plus |
| CG8541-RA | 956 | CG8541-RA | 610..660 | 539..589 | 180 | 90.2 | Plus |
| CG8541-RA | 956 | CG8541-RA | 613..660 | 371..418 | 180 | 91.7 | Plus |
| CG8541-RA | 956 | CG8541-RA | 406..453 | 578..625 | 180 | 91.7 | Plus |
| CG8541-RA | 956 | CG8541-RA | 574..624 | 575..625 | 180 | 90.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:59:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7471608..7472434 | 15..841 | 4135 | 100 | Plus |
| 3L | 28110227 | 3L | 7471957..7472091 | 535..669 | 315 | 82.2 | Plus |
| 3L | 28110227 | 3L | 7472128..7472262 | 364..498 | 315 | 82.2 | Plus |
| 3L | 28110227 | 3L | 7469676..7469734 | 528..470 | 220 | 91.5 | Minus |
| 3L | 28110227 | 3L | 7469691..7469749 | 627..569 | 220 | 91.5 | Minus |
| 3L | 28110227 | 3L | 7472063..7472113 | 584..634 | 210 | 94.1 | Plus |
| 3L | 28110227 | 3L | 7472177..7472227 | 470..520 | 210 | 94.1 | Plus |
| 3L | 28110227 | 3L | 7469967..7470103 | 249..113 | 205 | 76.6 | Minus |
| 3L | 28110227 | 3L | 7469693..7469743 | 418..368 | 195 | 92.2 | Minus |
| 3L | 28110227 | 3L | 7472033..7472104 | 518..589 | 195 | 84.7 | Plus |
| 3L | 28110227 | 3L | 7472111..7472182 | 440..511 | 195 | 84.7 | Plus |
Blast to na_te.dros performed 2014-11-28 07:59:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2774..3019 | 558..311 | 156 | 55.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2772..2854 | 539..457 | 127 | 61.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2751..2854 | 539..436 | 124 | 57.7 | Minus |
BO30783.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:39 Download gff for
BO30783.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8541-RA | 1..825 | 17..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:35 Download gff for
BO30783.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8541-RA | 52..876 | 17..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:08:36 Download gff for
BO30783.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8541-RA | 52..876 | 17..843 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:08:36 Download gff for
BO30783.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7471610..7472434 | 17..843 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:35 Download gff for
BO30783.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7464710..7465534 | 17..843 | 99 | | Plus |
BO30783.pep Sequence
Translation from 16 to 859
> BO30783.pep
MAFRYLISLCALVACANAGLLASHVAIANPSVDAVASTQQNVVRSFAGTV
SSYSKAVDTPYSSVRKSDTRIQNNVYTPAIKTTTYGAAPLYTQATPIVSK
TLVHAPAPVVEKTVYAAAPAPVLAKTVYSAPAPVVAKHVYSAPAQVYAPA
APVVAKTVYSAPAPVYAAPAPVYAAPAPVVAKTVYSAPAPVLAKTVYSAP
APVYAASAPAVAKTVSYAAPLATTNVNHGPAATTYTHNAPALGVSSYGSS
QTVHYSPAESVSHMSFDGFGTHWGFASFLDH
BO30783.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8541-PA | 275 | CG8541-PA | 1..275 | 1..275 | 1397 | 100 | Plus |
| CG8543-PA | 219 | CG8543-PA | 1..219 | 1..275 | 608 | 52.2 | Plus |
| CG7548-PA | 197 | CG7548-PA | 12..197 | 8..275 | 303 | 34.8 | Plus |
| CG11584-PB | 662 | CG11584-PB | 151..382 | 25..242 | 245 | 35.3 | Plus |
| CG32564-PA | 409 | CG32564-PA | 137..304 | 46..241 | 237 | 39.3 | Plus |
| CG11584-PB | 662 | CG11584-PB | 173..442 | 17..220 | 219 | 33 | Plus |
| CG11584-PB | 662 | CG11584-PB | 314..534 | 42..240 | 212 | 33.2 | Plus |
| CG11584-PB | 662 | CG11584-PB | 169..350 | 82..258 | 202 | 38.7 | Plus |
| CG11584-PB | 662 | CG11584-PB | 462..632 | 71..241 | 164 | 34.6 | Plus |
| CG11584-PB | 662 | CG11584-PB | 87..256 | 105..266 | 154 | 33 | Plus |
