BO30784.complete Sequence
869 bp assembled on 2012-03-05
> BO30784.complete
GAAGTTATCAGTCGACATGAAGCTATTTGGACTGCTCTGCGTAATGTTAG
TACTTCAAGAAAGTACTCTGGCTGTTGTACAAAACGGATTTGCGTTCAAG
ACGTCCTTATGCGAGGGTAAAAATGGTGGACTCTTGCCCATGTTTGGATC
CTGTAAAGGATATTACGTGTGTGCTGATGGAAACGCTGTGACCGGAACTT
GTGAAAAGAATACGTTGTTTAATCCTTTAACGTTGCACTGCGATGATCCT
GACAATGTGGATTGCATTTTCGATGGCAAGGATAATATTGTTGACGACAC
GTCAAGTTCTGAAAGCGACGAAGACGATGATGAGGAAATGGCCAAAACTG
ATCCTCCCGTTACTGTCAAAGCGACGAAAAAGCCGCGTCCTACAACCCTT
GACAAAATGTGTGCTGGCAAGAAGGATGGAGTGATGCTTACAAAGAACGG
GTCCTGCCAGGAATATTATGTCTGCAAAGCAAAAAAGCCCCATCTGCGCT
CTTGTCCTGACAAACAACATTTTAGTCCAACTCGTCGCATTTGCATGAAG
GCCTCAGAAGCCAAGTGTTCGGGTGGAACCCGAGAAAATAAAGAATCAGA
TGGTCCTGCCACCACGGGAGGAGTGTGTTCAGATGAAAAGGAAAACTCTC
TTGTTGCTCATCGCAGCGATTGTGGCAAGTTTATGCTCTGCAGCAACATG
ATGTTTTTGGTAATGGACTGCCCAACTGGCCTGCATTTCAATATAGCCAC
ATCACGATGCGATTATCCCAAAATTGCAAAATGCCAGACGAAGCTAAATG
AAAGCAAATCCAAGTCAAAGAAACCTGTGCGCAAGTCAAAAAAACGTCGA
TTCCAGCTTTCTAGACCAT
BO30784.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:00:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
obst-G-RA | 840 | CG9781-PA | 1..837 | 17..853 | 4185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:00:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
obst-G-RA | 962 | CG9781-RA | 25..861 | 17..853 | 4185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:00:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11952402..11953176 | 853..79 | 3860 | 99.9 | Minus |
3L | 28110227 | 3L | 11953228..11953293 | 82..17 | 330 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:00:20 has no hits.
BO30784.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:41 Download gff for
BO30784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
obst-G-RA | 1..837 | 17..853 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:39 Download gff for
BO30784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
obst-G-RA | 25..861 | 17..853 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:08:51 Download gff for
BO30784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
obst-G-RA | 25..861 | 17..853 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:08:51 Download gff for
BO30784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11952402..11953172 | 83..853 | 100 | <- | Minus |
3L | 11953228..11953293 | 17..82 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:39 Download gff for
BO30784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11945502..11946272 | 83..853 | 100 | <- | Minus |
arm_3L | 11946328..11946393 | 17..82 | 100 | | Minus |
BO30784.pep Sequence
Translation from 16 to 868
> BO30784.pep
MKLFGLLCVMLVLQESTLAVVQNGFAFKTSLCEGKNGGLLPMFGSCKGYY
VCADGNAVTGTCEKNTLFNPLTLHCDDPDNVDCIFDGKDNIVDDTSSSES
DEDDDEEMAKTDPPVTVKATKKPRPTTLDKMCAGKKDGVMLTKNGSCQEY
YVCKAKKPHLRSCPDKQHFSPTRRICMKASEAKCSGGTRENKESDGPATT
GGVCSDEKENSLVAHRSDCGKFMLCSNMMFLVMDCPTGLHFNIATSRCDY
PKIAKCQTKLNESKSKSKKPVRKSKKRRFQLSRP
BO30784.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
obst-G-PA | 279 | CG9781-PA | 1..279 | 1..279 | 1513 | 100 | Plus |
CG4835-PB | 1224 | CG4835-PB | 397..629 | 35..248 | 222 | 26 | Plus |
CG7248-PA | 796 | CG7248-PA | 541..762 | 29..256 | 198 | 25.7 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 1311..1512 | 28..255 | 193 | 26.3 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 1314..1447 | 132..265 | 186 | 29.4 | Plus |
CG4835-PB | 1224 | CG4835-PB | 273..530 | 32..248 | 184 | 22.8 | Plus |
CG33986-PB | 277 | CG33986-PB | 56..271 | 46..261 | 181 | 24.8 | Plus |
CG7248-PA | 796 | CG7248-PA | 59..257 | 29..254 | 171 | 23 | Plus |
CG7248-PA | 796 | CG7248-PA | 136..338 | 35..248 | 157 | 25.3 | Plus |
CG7248-PA | 796 | CG7248-PA | 373..590 | 37..250 | 152 | 21.5 | Plus |