BO30788.complete Sequence
745 bp assembled on 2012-03-05
GenBank Submission: KX796457
> BO30788.complete
GAAGTTATCAGTCGACATGTATCTACGCGCGCGTTTGGCTCTGCTGAGCC
TTCTCTTCCTGATGGTCTCCGGTCAGAGGAGTAAGTCCCGGAGTGAACGT
CCTCAAGGCAGGACCTTGGGATTATTGACTCCCCTTTTACTGGGAGGTGG
TGGACCGCTCTTCGATGTTCCCCTGCCCGCAGGACCACCCATCAGACCAG
GTGGTGGTTCATCCTCCGCAGCCGGAGGAGGCACCCAATCGGACTCATAC
TACGGCGGCAGTTATCCTAGCTACGGATACAGGCCCAACTATGGATACGG
ATATCCCAACTACGGTTATAACTATGGATACCCGGTCTTCGGCTACGGCT
ATGGGCAGAACTACTACAGACCCAGCTACTACAATTATGGTGGATACCAG
AGACCGCAGCCCTATTATGGTTACCGGCCCACTTATAGCTCCAGTGGAAC
TGCCGGATCAGGCGGTTATCCCTCATACAGCAGTTCAGCTGTCATCTCAA
GCTCTCCAACAAATTCGGCCGTTGGTTCGGCATCAGGAGCAGGAGCAGTA
TCCGGAGGTGGAACCCCACAGCTATCCACCGCTCAGCAAGCCCAGTTAGC
CGGTCTTTTGGGTCAGGCCCTTGGCAGCAGTCTACGCCCTCTTCTCGCCA
ATGGGGGCGGGGCAGCTGGAGCGACAGGAGCGGGAGCAAATCCACAAGCG
CTGAGCGGTCTACTCAGTCTGCTTGGCGCAAGCTTTCTAGACCAT
BO30788.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:04:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13226-RA | 714 | CG13226-PA | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:04:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13226-RA | 953 | CG13226-RA | 40..754 | 13..727 | 3560 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:03:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11244286..11245000 | 13..727 | 3560 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:04:00 has no hits.
BO30788.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:15:45 Download gff for
BO30788.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13226-RA | 1..711 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:05 Download gff for
BO30788.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13226-RA | 37..747 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:10:03 Download gff for
BO30788.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13226-RA | 44..754 | 17..729 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:10:03 Download gff for
BO30788.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11244290..11245000 | 17..729 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:05 Download gff for
BO30788.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7131795..7132505 | 17..729 | 99 | | Plus |
BO30788.pep Sequence
Translation from 16 to 745
> BO30788.pep
MYLRARLALLSLLFLMVSGQRSKSRSERPQGRTLGLLTPLLLGGGGPLFD
VPLPAGPPIRPGGGSSSAAGGGTQSDSYYGGSYPSYGYRPNYGYGYPNYG
YNYGYPVFGYGYGQNYYRPSYYNYGGYQRPQPYYGYRPTYSSSGTAGSGG
YPSYSSSAVISSSPTNSAVGSASGAGAVSGGGTPQLSTAQQAQLAGLLGQ
ALGSSLRPLLANGGGAAGATGAGANPQALSGLLSLLGASFLDH
BO30788.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13226-PA | 237 | CG13226-PA | 1..237 | 1..237 | 1251 | 100 | Plus |
| CG13285-PA | 198 | CG13285-PA | 58..171 | 93..203 | 156 | 37.7 | Plus |
| CG13285-PB | 154 | CG13285-PB | 58..144 | 93..181 | 152 | 42.9 | Plus |
| Edg91-PB | 151 | CG7539-PB | 1..142 | 9..181 | 149 | 35.3 | Plus |
| Edg91-PA | 159 | CG7539-PA | 9..150 | 9..181 | 149 | 35.3 | Plus |
