BO30789.complete Sequence
832 bp assembled on 2012-03-05
GenBank Submission: KX799839
> BO30789.complete
GAAGTTATCAGTCGACATGATGGCTGTCCGTTTGTCTCTGATTTGGCTGC
TTCTGCTGGGCACTTCCATTGACGTCACGCGCGGAAAGCGTTTGGACAAT
CGTAAACTTTTGGACAATCGCATTGTGGGTGGCCAGGAGGCGGAGGACGG
AGTGGCACCTTATCAGGTGTCCATTCAGACCATCTGGAAAACCCACATCT
GCAGCGGAGTCATTCTCAACGAACAGTGGATCCTCACCGCGGGTCATTGT
GCACTGGACTTTAGCATCGAGGATCTAAGGATTATAGTGGGCACGAATGA
TCGTCTGGAGCCAGGACAGACCTTATTTCCGGACGAGGCCCTAGTCCATT
GCTTGTACGACATACCCTATGTCTACAATAATGACATAGCGTTGATCCAT
GTCAACGAGTCGATTATATTCAATGATCGCACCCAGATCGTTGAGTTGAG
CCGAGAGCAACCTCCGGCGGGTTCCACGGTCACTCTGACGGGATGGGGTG
CTCCGGAAAGTAGCTATCCCACAGTGCAATATCTGCAGACCCTCAACCTG
ACCATCATCGCACACGAGGAGTGCAGAGAGAGATGGGACTTTCACGATGG
CATCGACATCGGTCATATTTGCACCTTTACGCGAGAGGGCGAGGGTGCCT
GCTCCGGAGACTCCGGTGGTCCACTGATGTGGGAGGGCAAACTGGTGGGC
CTGGTCAACTGGGGCAGAGCCTGCGGCGTCGGCATGCCAGACATGTATGC
CAACACGGTTTACTATCAGGATTGGATCCGCAGGACTCATTCAGGATGCA
AGAATCGTGTTAACGCAAGCTTTCTAGACCAT
BO30789.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:22:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4053-RB | 798 | CG4053-PB | 1..795 | 20..814 | 3975 | 100 | Plus |
| CG31265-RA | 801 | CG31265-PA | 595..716 | 611..732 | 205 | 77.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4053-RB | 925 | CG4053-RB | 40..837 | 17..814 | 3990 | 100 | Plus |
| CG31265-RA | 909 | CG31265-RA | 629..750 | 611..732 | 205 | 77.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17131429..17132159 | 747..17 | 3655 | 100 | Minus |
| 3R | 32079331 | 3R | 17131299..17131368 | 814..745 | 350 | 100 | Minus |
| 3R | 32079331 | 3R | 17128840..17128961 | 611..732 | 205 | 77.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:22:12 has no hits.
BO30789.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 18:22:44 Download gff for
BO30789.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4053-RB | 1..795 | 20..816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:24 Download gff for
BO30789.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4053-RB | 40..837 | 17..816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:09:42 Download gff for
BO30789.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4053-RB | 40..837 | 17..816 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:09:42 Download gff for
BO30789.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17131297..17131368 | 745..816 | 97 | <- | Minus |
| 3R | 17131432..17132159 | 17..744 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:24 Download gff for
BO30789.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12957019..12957090 | 745..816 | 97 | <- | Minus |
| arm_3R | 12957154..12957881 | 17..744 | 100 | | Minus |
BO30789.pep Sequence
Translation from 16 to 832
> BO30789.pep
MMAVRLSLIWLLLLGTSIDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQ
VSIQTIWKTHICSGVILNEQWILTAGHCALDFSIEDLRIIVGTNDRLEPG
QTLFPDEALVHCLYDIPYVYNNDIALIHVNESIIFNDRTQIVELSREQPP
AGSTVTLTGWGAPESSYPTVQYLQTLNLTIIAHEECRERWDFHDGIDIGH
ICTFTREGEGACSGDSGGPLMWEGKLVGLVNWGRACGVGMPDMYANTVYY
QDWIRRTHSGCKNRVNASFLDH
BO30789.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4053-PB | 265 | CG4053-PB | 1..265 | 2..266 | 1434 | 100 | Plus |
| CG31265-PA | 266 | CG31265-PA | 36..260 | 35..260 | 597 | 50 | Plus |
| CG31269-PB | 273 | CG31269-PB | 3..261 | 7..260 | 558 | 44.6 | Plus |
| CG5255-PA | 273 | CG5255-PA | 28..252 | 34..258 | 531 | 47.6 | Plus |
| CG5246-PA | 272 | CG5246-PA | 39..263 | 33..256 | 525 | 43.6 | Plus |
