Clone BO30802 Report

Search the DGRC for BO30802

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:308
Well:2
Vector:pDNR-Dual
Associated Gene/TranscriptCG18259-RA
Protein status:BO30802.pep: Imported from assembly
Sequenced Size:1456

Clone Sequence Records

BO30802.complete Sequence

1456 bp assembled on 2012-03-05

GenBank Submission: KX798995

> BO30802.complete
GAAGTTATCAGTCGACATGGACATCGATTTGAGTCTGGACGAGATTATAG
AGCGGAAGCGCGGGCAACGCGGCTATCGTCCCCTCGACAGAAAGTTCAAT
GCGAACTTCTCCAAGCCGCGCCAGCTGCTGAACAAGCCTTTTTTCAAGCC
ATCGGGTGCCCGAGGATCTCACTCTGATACGCCGGCAAAGCGCACCTTCG
ATGCCAGAAACACGATCGCCGCGAAGACACGGGCCAAGATAGCCGATGCC
CGGGATCTGATCAACAAGAGCGTGCGCGACTCGGGCATCGATGCCCGCCA
GCTGTTGCTGGAGCGAAAGAAGGCCCGTTCGGCGGGCCCAATACTTATTG
ATGACGAAGAAGAGTCGTTTGAGCCATCACATCGCGCACGCGGAAAGGGA
GTGCACATCGGTCAGTTTGGTCACCGCCTTAGCATGTCAAACCATGCGGA
CGGCACCATTCAGGCGAAATGGGACTCGGACGACGGGGTCGTTGAACTGG
GTAACCACATGTTGTCCGGCTTGCGTCGAACCTTTGACCCCAGATCCCAT
AAGCCGGGCAAACCCTTTGCTCCACGACGCTATATTGATCTTGATAATAT
GCAGGACCTCGAGGATGAGGAAATATCTCGCACACTGCACTTAGGGCAAA
TGAAGCAAGCGTCGCCACGCTACTCAATTGGTGGGCTCGACCTGAACCGC
GGCGACGACGTGGAGATGTCCATGGCCCCACTAAATAACAAAATAGATAA
CAATGCATTCTCCATTTACGAGGCGGCCCGCAATCGCATTGAGCGTCCTT
CGCTGACCAACCGACTCGTAGTTGGACGCTCAAATACCACCAAGGAGCCT
CTCGAGCGCCGCCACCGCGACACAGCAAGCACAAGTAAACTCCCAGAATC
GCTGCGGTCTCGTCTGTTTGTCGGTAAGAGGGATCCTCACATTTCTCATG
GCATCTACGCCAACGAGAACCGGAGAAAGGCTGTTGGTGGCGGTGGTGCT
AGGGATAGCGATAGCGGTACTGATAGTGATGGTGATGCAGCTGCTCCATC
GAAGAACAAGCGCCGTTCGCCATCCCCATTGTCGCTGCGTACGTCGAACA
CAAAGGATGGATACCGCCTGCTGGTGAGCAATCTGCATACTAACGTGACT
ACTGCGGATATTCGCGAGCTTTTTAGCGACATCGGCCCAGTGTACGACGC
TCGTGTGGTGCGTCCCGGCACCGCCGAAGTTATTTACAAGTCACTGGAAC
ATGCCGAGAAGGCCGTAGATACCTATCACCATCGTCAGTTCGATGACCAG
CCCATGCACTGTGTGCTGGTTAATCCGCACTCCTCCCGTCGCTCGGTGCA
CAAAGCCAGCTCTCGCACCGTGACCACAAACTCGTCTGGCGTGGAGGTGG
ACATCGATGCACTTCACTCGGTACTCTTCAGGGTCCGCGCAAGCTTTCTA
GACCAT

BO30802.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:22:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG18259-RA 1425 CG18259-PA 1..1422 17..1438 7110 100 Plus
CG6961-RA 1425 CG6961-PA 1..1422 17..1438 6915 99.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:22:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG18259-RA 2055 CG18259-RA 119..1541 16..1438 7115 100 Plus
CG6961-RA 1894 CG6961-RA 150..1572 16..1438 6920 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:22:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18781914..18782656 1359..617 3715 100 Minus
X 23542271 X 18786599..18787341 1359..617 3610 99.1 Minus
X 23542271 X 18782713..18783233 617..97 2605 100 Minus
X 23542271 X 18787398..18787918 617..97 2530 99 Minus
X 23542271 X 18781779..18781859 1438..1358 405 100 Minus
X 23542271 X 18783296..18783376 96..16 405 100 Minus
X 23542271 X 18787981..18788061 96..16 405 100 Minus
X 23542271 X 18786464..18786544 1438..1358 390 98.8 Minus
Blast to na_te.dros performed on 2014-11-28 08:22:57 has no hits.

BO30802.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:14 Download gff for BO30802.complete
Subject Subject Range Query Range Percent Splice Strand
CG18259-RA 117..1538 17..1440 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:05 Download gff for BO30802.complete
Subject Subject Range Query Range Percent Splice Strand
CG18259-RA 120..1541 17..1440 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:16:50 Download gff for BO30802.complete
Subject Subject Range Query Range Percent Splice Strand
CG18259-RA 120..1541 17..1440 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:16:50 Download gff for BO30802.complete
Subject Subject Range Query Range Percent Splice Strand
X 18781777..18781857 1360..1440 97 <- Minus
X 18781914..18782655 618..1359 100 <- Minus
X 18782713..18783233 97..617 100 <- Minus
X 18783296..18783375 17..96 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:05 Download gff for BO30802.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18675810..18675890 1360..1440 97 <- Minus
arm_X 18675947..18676688 618..1359 100 <- Minus
arm_X 18676746..18677266 97..617 100 <- Minus
arm_X 18677329..18677408 17..96 100   Minus

BO30802.pep Sequence

Translation from 16 to 1456

> BO30802.pep
MDIDLSLDEIIERKRGQRGYRPLDRKFNANFSKPRQLLNKPFFKPSGARG
SHSDTPAKRTFDARNTIAAKTRAKIADARDLINKSVRDSGIDARQLLLER
KKARSAGPILIDDEEESFEPSHRARGKGVHIGQFGHRLSMSNHADGTIQA
KWDSDDGVVELGNHMLSGLRRTFDPRSHKPGKPFAPRRYIDLDNMQDLED
EEISRTLHLGQMKQASPRYSIGGLDLNRGDDVEMSMAPLNNKIDNNAFSI
YEAARNRIERPSLTNRLVVGRSNTTKEPLERRHRDTASTSKLPESLRSRL
FVGKRDPHISHGIYANENRRKAVGGGGARDSDSGTDSDGDAAAPSKNKRR
SPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPVYDARVVRP
GTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPHSSRRSVHKASSR
TVTTNSSGVEVDIDALHSVLFRVRASFLDH

BO30802.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG18259-PA 474 CG18259-PA 1..474 1..474 2449 100 Plus
CG6961-PA 474 CG6961-PA 1..474 1..474 2421 98.7 Plus