BO30806.complete Sequence
370 bp assembled on 2012-03-05
GenBank Submission: KX799828
> BO30806.complete
GAAGTTATCAGTCGACATGAGATCGTGTACTTTACTTGTTTTCATAGTGA
GCACGCTGTTGTTTGCCGTGACAAATGCGCAGCAGAATTATGATGGAAGA
AATGGTCCCCATGAGTTCGGCACACCTGGAAACGGCATTTACATACGGGG
TCAGAACGAAGGACCCTACACAGTGCCCGAAATGGGAGGAACGTTCCAAA
ACTCACCCTCAAGTGGGCAGCATTCCTACACCGATGAGCACGGAAATACT
TACACCCATTCCTCAACGGCAACTGTCACAAGTTTGGCCTATTCAACCTT
CGGTTTCAGCATGGGCGGCGTTCTCATTTTTCTAATTAGTTTAATAACCA
TTGCAAGCTTTCTAGACCAT
BO30806.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:11:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30285-RA | 339 | CG30285-PA | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:11:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30285-RA | 575 | CG30285-RA | 35..371 | 16..352 | 1685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:11:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21688107..21688391 | 352..68 | 1425 | 100 | Minus |
2R | 25286936 | 2R | 21688459..21688511 | 68..16 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:11:36 has no hits.
BO30806.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:50:39 Download gff for
BO30806.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30285-RA | 12..347 | 17..354 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:49 Download gff for
BO30806.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30285-RA | 36..371 | 17..354 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:05:51 Download gff for
BO30806.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30285-RA | 36..371 | 17..354 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:05:51 Download gff for
BO30806.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21688105..21688390 | 69..354 | 99 | <- | Minus |
2R | 21688459..21688510 | 17..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:49 Download gff for
BO30806.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17575610..17575895 | 69..354 | 99 | <- | Minus |
arm_2R | 17575964..17576015 | 17..68 | 100 | | Minus |
BO30806.pep Sequence
Translation from 16 to 370
> BO30806.pep
MRSCTLLVFIVSTLLFAVTNAQQNYDGRNGPHEFGTPGNGIYIRGQNEGP
YTVPEMGGTFQNSPSSGQHSYTDEHGNTYTHSSTATVTSLAYSTFGFSMG
GVLIFLISLITIASFLDH
BO30806.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30285-PA | 112 | CG30285-PA | 1..112 | 1..112 | 591 | 100 | Plus |
CG33470-PC | 257 | CG33470-PC | 1..85 | 1..85 | 254 | 51.8 | Plus |
CG33470-PA | 257 | CG33470-PA | 1..85 | 1..85 | 254 | 51.8 | Plus |
IM10-PC | 257 | CG18279-PC | 1..85 | 1..85 | 254 | 51.8 | Plus |
IM10-PA | 257 | CG18279-PA | 1..85 | 1..85 | 254 | 51.8 | Plus |