BO30861.complete Sequence
424 bp assembled on 2012-05-15
GenBank Submission: KX799479
> BO30861.complete
GAAGTTATCAGTCGACATGTCCAGAAGTTCGAGGTTATCAGTAACTGAAA
CTCAGCGCAAAAGCACTCCAGTGGTAAAGAAGGCGGTTATTCGCAGTCGA
TCCTACGATGGGGATGCGTTCGTCAATCTCTTCGCCCATCGCGGCGCCCG
AGACATCATGATCTTGGATAGCCATGGAGTGCCCCTCCGATCCACCTGCA
GTCAGAGACGCACCTTCGTGTTCGTCTCTAACCTGAAGCCGCTGCTCTTC
ATGGCCCGCAACGTGGTCAGGGATCTGGACCCCTCGAACGACATAACCTT
CATGCGGATTCGCTCCAATATGGGCGAAATCCACATGACCCTGGGCACGG
ACTTCATTTTGATCGTTGTGCAGAAGCTGAGGAGGCTCAGGAGCAGCTCA
ACATCAGCAAGCTTTCTAGACCAT
BO30861.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:20:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16837-RA | 393 | CG16837-PA | 1..390 | 17..406 | 1950 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:20:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16837-RA | 576 | CG16837-RA | 86..475 | 17..406 | 1950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:20:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24475616..24475931 | 91..406 | 1580 | 100 | Plus |
2R | 25286936 | 2R | 24475471..24475544 | 17..90 | 370 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 11:20:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 7892..7962 | 253..183 | 103 | 60.6 | Minus |
BO30861.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 14:08:13 Download gff for
BO30861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16837-RA | 46..435 | 17..408 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:24 Download gff for
BO30861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16837-RA | 86..475 | 17..408 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:00 Download gff for
BO30861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16837-RA | 86..475 | 17..408 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:00 Download gff for
BO30861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24475471..24475544 | 17..90 | 100 | -> | Plus |
2R | 24475616..24475931 | 91..408 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:24 Download gff for
BO30861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20362994..20363067 | 17..90 | 100 | -> | Plus |
arm_2R | 20363139..20363454 | 91..408 | 99 | | Plus |
BO30861.pep Sequence
Translation from 16 to 424
> BO30861.pep
MSRSSRLSVTETQRKSTPVVKKAVIRSRSYDGDAFVNLFAHRGARDIMIL
DSHGVPLRSTCSQRRTFVFVSNLKPLLFMARNVVRDLDPSNDITFMRIRS
NMGEIHMTLGTDFILIVVQKLRRLRSSSTSASFLDH
BO30861.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:35:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16837-PA | 130 | CG16837-PA | 1..130 | 1..130 | 644 | 100 | Plus |
robl-PA | 97 | CG10751-PA | 14..93 | 40..119 | 175 | 42.5 | Plus |