Clone BO30870 Report

Search the DGRC for BO30870

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:308
Well:70
Vector:pDNR-Dual
Associated Gene/TranscriptGstE9-RA
Protein status:BO30870.pep: Imported from assembly
Sequenced Size:697

Clone Sequence Records

BO30870.complete Sequence

697 bp assembled on 2012-03-05

GenBank Submission: KX798098

> BO30870.complete
GAAGTTATCAGTCGACATGGGAAAATTAGTACTGTACGGCGTAGAGGCTA
GTCCGCCGGTGCGAGCATGCAAACTGACCCTCGACGCCCTGGGCCTTCAG
TATGAGTATAGGCTGGTGAACCTGCTGGCCGGTGAGCACAAGACGAAGGA
GTTCAGCCTGAAGAATCCGCAGCACACGGTACCCGTGCTGGAGGACGATG
GCAAGTTCATCTGGGAGAGTCACGCCATTTGCGCTTATCTGGTTAGACGC
TATGCCAAGAGTGATGACCTGTATCCCAAGGATTACTTCAAACGCGCACT
CGTTGATCAGCGCCTGCACTTTGAGTCGGGTGTGTTATTCCAGGGCTGCA
TCCGGAACATAGCCATTCCGTTGTTCTACAAGAACATAACTGAGGTGCCG
CGTTCCCAGATTGATGCCATCTACGAGGCCTATGACTTTCTGGAAGCGTT
CATCGGTAATCAGGCTTACCTCTGCGGACCGGTCATAACCATCGCCGACT
ACAGTGTAGTTTCCTCGGTCTCCAGCCTAGTGGGATTGGCCGCTATCGAT
GCCAAGCGCTATCCCAAGTTAAACGGCTGGCTAGACAGAATGGCCGCACA
GCCCAATTACCAGTCGCTCAATGGCAATGGGGCACAGATGTTGATCGACA
TGTTCAGTTCGAAGATCACAAAGATTGTGGCAAGCTTTCTAGACCAT

BO30870.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:23:49
Subject Length Description Subject Range Query Range Score Percent Strand
GstE9-RA 666 CG17534-PA 1..663 17..679 3315 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:23:51
Subject Length Description Subject Range Query Range Score Percent Strand
GstE9-RA 788 CG17534-RA 44..706 17..679 3315 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:23:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18409091..18409753 17..679 3315 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:23:48 has no hits.

BO30870.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:15 Download gff for BO30870.complete
Subject Subject Range Query Range Percent Splice Strand
GstE9-RA 81..743 17..681 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:12 Download gff for BO30870.complete
Subject Subject Range Query Range Percent Splice Strand
GstE9-RA 44..706 17..681 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:17:08 Download gff for BO30870.complete
Subject Subject Range Query Range Percent Splice Strand
GstE9-RA 44..706 17..681 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:17:08 Download gff for BO30870.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18409091..18409753 17..681 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:12 Download gff for BO30870.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14296596..14297258 17..681 99   Plus

BO30870.pep Sequence

Translation from 16 to 697

> BO30870.pep
MGKLVLYGVEASPPVRACKLTLDALGLQYEYRLVNLLAGEHKTKEFSLKN
PQHTVPVLEDDGKFIWESHAICAYLVRRYAKSDDLYPKDYFKRALVDQRL
HFESGVLFQGCIRNIAIPLFYKNITEVPRSQIDAIYEAYDFLEAFIGNQA
YLCGPVITIADYSVVSSVSSLVGLAAIDAKRYPKLNGWLDRMAAQPNYQS
LNGNGAQMLIDMFSSKITKIVASFLDH

BO30870.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:21
Subject Length Description Subject Range Query Range Score Percent Strand
GstE9-PA 221 CG17534-PA 1..221 1..221 1147 100 Plus
GstE7-PA 223 CG17531-PA 1..207 1..207 603 55.1 Plus
GstE6-PA 222 CG17530-PA 1..213 1..213 594 53.1 Plus
GstE8-PB 222 CG17533-PB 1..212 1..212 586 51.9 Plus
GstE8-PA 222 CG17533-PA 1..212 1..212 586 51.9 Plus