BO30874.complete Sequence
970 bp assembled on 2012-03-05
GenBank Submission: KX795038
> BO30874.complete
GAAGTTATCAGTCGACATGAAGGAAGGAAAATTGGAGCAGACGCGCAGTA
AACTAGAGCAAATACTTAATATCCATAAGCCAAATTATCTGGATAGTACT
TTTCAAGAGCTTCTTCCCAATTTTTGCAAAGGATTTCTATTCAGCGAAAA
ATGGGTTAAGTGGATCAAAATTGTTTTGCTCGGAACTCTTATTTTATTGG
GAGTTAAATACTACTATGAAGAAATGCAGGGAAAGAATTGCGCTCTATAT
CTGCCTCGCAACTTGCGTTACGCTTTCCGACCGCCTGAAAATTGTAATTT
CTGTGCAAATATTAAAAATGTGCCGCGACTTAAAAATATTAGCCCCCAGG
AGTTTGAGAAAAAATTCGCATACAGTGCAGCGCCAGTTATCATTAGTGAT
GCCACTAAAAATTGGACAGCAGTTTCGTTATTTAACTACTGGTATTTTCG
CGATGTTTATACCAAGGCCAAGCAAAAGCAGCACATAAGGGAATGCCAGT
TCCTGCCGTATAAAACCGGATTTTTGGATATCTATGACGCTTTGGATATG
CCCGAGGATCGGGTGGAGCTAAAACCAGGCGAACAGCCCTGGTACTTCGG
CTGGAGCAACTGCCATGCGGAAACCGCAGAGGAATTCCGCAGGCACTATG
GTAGACCATATTTTCTGCCCGAAGGCTCGGAAAACAATGCTGTTGATTGG
TTTTTCATTGGCTTATCCGGCTTGGGTGCCCAAATGCATATTGACAACGT
GAGACTGCCATCGTGGCAGGCTCAGCTGGCGGGCAGCAAGCGATGGCTAC
TGGTTCCACCTCCCGAGTGCTACCTGCAGTGCCGGAGATTCGACGTGGTG
GTCCAACAGGGCGACATAATTGTGTTGGACACGAACAAGTGGTACCACCA
GACCTTTGTGCAGCCGGGAGCCATCAGCCTGACCATTGGAGCTGAGTACG
ACGCAAGCTTTCTAGACCAT
BO30874.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:24:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14331-RC | 939 | CG14331-PC | 1..936 | 17..952 | 4680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:24:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14331-RC | 1143 | CG14331-RC | 25..960 | 17..952 | 4680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:24:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17439836..17440148 | 739..427 | 1565 | 100 | Minus |
| 3R | 32079331 | 3R | 17440486..17440704 | 235..17 | 1095 | 100 | Minus |
| 3R | 32079331 | 3R | 17440208..17440401 | 427..234 | 970 | 100 | Minus |
| 3R | 32079331 | 3R | 17439296..17439430 | 869..735 | 660 | 99.3 | Minus |
| 3R | 32079331 | 3R | 17439151..17439233 | 952..870 | 415 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:24:24 has no hits.
BO30874.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:16 Download gff for
BO30874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14331-RC | 25..960 | 17..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:18 Download gff for
BO30874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14331-RC | 25..960 | 17..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:17:24 Download gff for
BO30874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14331-RC | 25..960 | 17..954 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:17:24 Download gff for
BO30874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17439149..17439233 | 870..954 | 97 | <- | Minus |
| 3R | 17439296..17439425 | 740..869 | 100 | <- | Minus |
| 3R | 17439836..17440147 | 428..739 | 100 | <- | Minus |
| 3R | 17440208..17440399 | 236..427 | 100 | <- | Minus |
| 3R | 17440486..17440704 | 17..235 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:18 Download gff for
BO30874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13264871..13264955 | 870..954 | 97 | <- | Minus |
| arm_3R | 13265018..13265147 | 740..869 | 100 | <- | Minus |
| arm_3R | 13265558..13265869 | 428..739 | 100 | <- | Minus |
| arm_3R | 13265930..13266121 | 236..427 | 100 | <- | Minus |
| arm_3R | 13266208..13266426 | 17..235 | 100 | | Minus |
BO30874.pep Sequence
Translation from 16 to 970
> BO30874.pep
MKEGKLEQTRSKLEQILNIHKPNYLDSTFQELLPNFCKGFLFSEKWVKWI
KIVLLGTLILLGVKYYYEEMQGKNCALYLPRNLRYAFRPPENCNFCANIK
NVPRLKNISPQEFEKKFAYSAAPVIISDATKNWTAVSLFNYWYFRDVYTK
AKQKQHIRECQFLPYKTGFLDIYDALDMPEDRVELKPGEQPWYFGWSNCH
AETAEEFRRHYGRPYFLPEGSENNAVDWFFIGLSGLGAQMHIDNVRLPSW
QAQLAGSKRWLLVPPPECYLQCRRFDVVVQQGDIIVLDTNKWYHQTFVQP
GAISLTIGAEYDASFLDH
BO30874.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14331-PC | 312 | CG14331-PC | 1..312 | 1..312 | 1715 | 100 | Plus |
| CG2211-PB | 330 | CG2211-PB | 71..329 | 54..311 | 397 | 34 | Plus |
| CG2211-PA | 330 | CG2211-PA | 71..329 | 54..311 | 397 | 34 | Plus |
