BO30916.complete Sequence
1117 bp assembled on 2012-03-19
GenBank Submission: KX795529
> BO30916.complete
GAAGTTATCAGTCGACATGAGCCAACCTGCATCTCCTACCAAGTGGCGCA
CCTCGGCCAGTGTAATCCTGGTGTCCAGAGATGATGGCAATAACAAAGAT
TACAAGGTGCTTATGCTAAAACGCAGTGATGCCACGGCGATTGCGCTCAA
TCAGACTGTATTTCCCGGTGGCCTCTTGGACTCTGGGGCCGATGAAAGCG
TCGCCTGGCTGCACTACCTCGAGGAGTTTGGTGTTCCACAAGAGGCACTA
CGCCGCCTGGTTCTCATCCGCGAAGATCGTCCTGCCATTCTGGCGCCCCA
GGGCACTGGCTGCTACGATCGGTTCTTTAAGCGTTCCCGCATTTGGGCTC
GGGAGATTACGCTGCGACTAACCGCCGTGAGGGAATGCTTTGAAGAGGTG
GGTCTGTTGCTTTGCCGGAGTCGGAGTCAACTGGATTTTGGTGCGGTAAC
TTGCGCTCAGGCTGTTCCAGACCTGGAGTCGTGGCAGCGAAGGGTGCACA
ACAAGCCGGCTGAGTTTCTAACTCTCTGCCGCGAGCTAAATGTAGTTCCA
GATTTGTGGGCTCTGCATGAGTGGTCTGCCTGGGCGAGTCCAGGATTCAT
ACGCAAAGGGCATGAAACCGTTTTCTTCATGGCTTTTGTGGACAAGCAGC
CCGAATTGCTGGAAGAACCTTCCGAGGTCAAGGAAACGCTGTGGCTGACA
CCCGTTGAACTGCTGCGACTGGCTGATTTGGGCAATGTTTGGTTCATGCC
ACCACAGGTCTACGAATTGTCCCGGTTGATGGGAATTAAGGCGTATCAAT
CCCTGTTGGAATTTGCCATCAAGCGCAGCGGATTGGGAACGACCATGTTC
TTGCCGATTGGTTATAACTGCCAGGGCTCTATGGTTTTCGTCTTACCTGG
CGATGACTTCTATGTTCCCGAACCTCACTTGGTTCACGAAATAATCAGTT
TTCCGGGATCAGAAGAAGAGTTTAGGGCTCGTTCAAAGCATCTGCATCGC
TATACCTATGGTCCTGGTGTTCGAAACTTGGAGTTAAATATTGCGCCGCC
AAATGGACACTTGAAACCGCTGAAATTTCAGGCGGAGCGCCAAAAGCTGG
CAAGCTTTCTAGACCAT
BO30916.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:04:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10195-RB | 1086 | CG10195-PB | 1..1083 | 17..1099 | 5415 | 100 | Plus |
| CG10195-RC | 1086 | CG10195-PC | 1..1083 | 17..1099 | 5415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:04:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10195-RB | 1473 | CG10195-RB | 105..1187 | 17..1099 | 5415 | 100 | Plus |
| CG10195-RC | 2118 | CG10195-RC | 105..1187 | 17..1099 | 5415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:04:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19483888..19484147 | 610..351 | 1300 | 100 | Minus |
| 2L | 23513712 | 2L | 19484213..19484460 | 352..105 | 1240 | 100 | Minus |
| 2L | 23513712 | 2L | 19483426..19483635 | 900..691 | 1050 | 100 | Minus |
| 2L | 23513712 | 2L | 19483163..19483363 | 1099..899 | 1005 | 100 | Minus |
| 2L | 23513712 | 2L | 19484511..19484601 | 107..17 | 455 | 100 | Minus |
| 2L | 23513712 | 2L | 19483692..19483774 | 691..609 | 415 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:04:32 has no hits.
BO30916.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:08 Download gff for
BO30916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10195-RB | 102..1184 | 17..1101 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:55 Download gff for
BO30916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10195-RC | 105..1187 | 17..1101 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:55 Download gff for
BO30916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10195-RC | 105..1187 | 17..1101 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:55 Download gff for
BO30916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19484214..19484458 | 107..351 | 100 | <- | Minus |
| 2L | 19484508..19484601 | 17..106 | 95 | | Minus |
| 2L | 19483161..19483362 | 900..1101 | 99 | <- | Minus |
| 2L | 19483427..19483634 | 692..899 | 100 | <- | Minus |
| 2L | 19483692..19483773 | 610..691 | 100 | <- | Minus |
| 2L | 19483889..19484146 | 352..609 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:55 Download gff for
BO30916.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19483161..19483362 | 900..1101 | 99 | <- | Minus |
| arm_2L | 19483427..19483634 | 692..899 | 100 | <- | Minus |
| arm_2L | 19483692..19483773 | 610..691 | 100 | <- | Minus |
| arm_2L | 19483889..19484146 | 352..609 | 100 | <- | Minus |
| arm_2L | 19484214..19484458 | 107..351 | 100 | <- | Minus |
| arm_2L | 19484508..19484601 | 17..106 | 95 | | Minus |
BO30916.pep Sequence
Translation from 16 to 1117
> BO30916.pep
MSQPASPTKWRTSASVILVSRDDGNNKDYKVLMLKRSDATAIALNQTVFP
GGLLDSGADESVAWLHYLEEFGVPQEALRRLVLIREDRPAILAPQGTGCY
DRFFKRSRIWAREITLRLTAVRECFEEVGLLLCRSRSQLDFGAVTCAQAV
PDLESWQRRVHNKPAEFLTLCRELNVVPDLWALHEWSAWASPGFIRKGHE
TVFFMAFVDKQPELLEEPSEVKETLWLTPVELLRLADLGNVWFMPPQVYE
LSRLMGIKAYQSLLEFAIKRSGLGTTMFLPIGYNCQGSMVFVLPGDDFYV
PEPHLVHEIISFPGSEEEFRARSKHLHRYTYGPGVRNLELNIAPPNGHLK
PLKFQAERQKLASFLDH
BO30916.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:57:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10195-PB | 361 | CG10195-PB | 1..361 | 1..361 | 1910 | 100 | Plus |
| CG10195-PC | 361 | CG10195-PC | 1..361 | 1..361 | 1910 | 100 | Plus |
| CG18094-PB | 360 | CG18094-PB | 8..347 | 10..349 | 540 | 35.3 | Plus |
| CG18094-PA | 360 | CG18094-PA | 8..347 | 10..349 | 540 | 35.3 | Plus |
| CG10194-PA | 351 | CG10194-PA | 7..321 | 9..328 | 535 | 36.3 | Plus |
