BO30927.complete Sequence
490 bp assembled on 2012-03-19
GenBank Submission: KX796570
> BO30927.complete
GAAGTTATCAGTCGACATGCTAGTCATAAACTCATGCAGAGCTGCCTCCA
GATTGGCGCTACGCAGCCTCAATTTGCGATCGCCGATCGCAACGCGTACT
TTCTCGACGGGATTGGCCCTGAAAACGAAAGATGTTGTTAACATAACCTT
CGTGCGTGCCAATGGGGACAAGATTAAGACGTCCGGAAAAGTGGGTGACT
CCCTGCTGGACGTGGTGGTCAACAACAATGTGGATCTGGATGGTTTCGGG
GCCTGTGAGGGCACGCTGACCTGCTCCACCTGCCACCTGATCTTCAAGAC
CAGCGATTTCGAGAAACTGCCCGACAAACCCGGTGATGAGGAGCTGGACA
TGCTGGATTTGGCGTACGAACTGACGGACACCTCGCGGCTGGGCTGCCAG
ATCACCCTGTCCAAGGATATGGAGGGCCTGGAGGTACATGTGCCCTCCAC
CATCAATGACGCACGTGCCGCGGCAAGCTTTCTAGACCAT
BO30927.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:04:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1319-RB | 459 | CG1319-PB | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:04:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1319-RB | 863 | CG1319-RB | 143..598 | 17..472 | 2280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:04:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4292831..4293167 | 136..472 | 1685 | 100 | Plus |
| 3L | 28110227 | 3L | 4292624..4292742 | 17..135 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:04:39 has no hits.
BO30927.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:10 Download gff for
BO30927.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1319-RB | 128..583 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:00 Download gff for
BO30927.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1319-RB | 143..598 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:59 Download gff for
BO30927.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1319-RB | 143..598 | 17..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:59 Download gff for
BO30927.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4292624..4292742 | 17..135 | 100 | -> | Plus |
| 3L | 4292831..4293167 | 136..474 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:00 Download gff for
BO30927.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4292624..4292742 | 17..135 | 100 | -> | Plus |
| arm_3L | 4292831..4293167 | 136..474 | 99 | | Plus |
BO30927.pep Sequence
Translation from 16 to 490
> BO30927.pep
MLVINSCRAASRLALRSLNLRSPIATRTFSTGLALKTKDVVNITFVRANG
DKIKTSGKVGDSLLDVVVNNNVDLDGFGACEGTLTCSTCHLIFKTSDFEK
LPDKPGDEELDMLDLAYELTDTSRLGCQITLSKDMEGLEVHVPSTINDAR
AAASFLDH
BO30927.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:57:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1319-PB | 152 | CG1319-PB | 1..152 | 1..152 | 772 | 100 | Plus |
| Fdxh-PB | 172 | CG4205-PB | 53..156 | 37..143 | 228 | 42.1 | Plus |
| Fdxh-PA | 172 | CG4205-PA | 53..156 | 37..143 | 228 | 42.1 | Plus |
