BO30942.complete Sequence
529 bp assembled on 2012-03-19
GenBank Submission: KX797922
> BO30942.complete
GAAGTTATCAGTCGACATGGCCGATGTGTTGGACATTGACAATGCGGAGG
AGTTCGAGGTGGACGAGGACGGTGACCAGGGCATTGTGCGCCTGAAGGAA
AAGGCGAAGCACCGCAAGGGACGCGGATTTGGAAGCGACAGTAACACCCG
AGAGGCGATCCACAGCTACGAGCGTGTGCGCAACGAGGACGACGATGAGC
TGGAACCTGGTCCACAAAGGTCCGTCGAGGGCTGGATACTGTTTGTCACC
TCTATCCATGAGGAGGCGCAGGAGGACGAGATTCAGGAAAAGTTCTGCGA
TTACGGAGAAATCAAGAACATTCACCTGAACCTCGACCGGCGTACTGGGT
TCTCAAAGGGATACGCTCTCGTCGAGTACGAGACCCACAAGCAGGCGCTC
GCCGCCAAAGAGGCCCTGAACGGTGCCGAAATAATGGGACAGACCATTCA
GGTTGACTGGTGCTTCGTTAAGGGACCGAAGCGCGTTAAAAAGTCCGAAA
AGCGTCGCAGAGCAAGCTTTCTAGACCAT
BO30942.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:05:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tsu-RA | 498 | CG8781-PA | 1..495 | 17..511 | 2475 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:05:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tsu-RA | 691 | CG8781-RA | 98..592 | 17..511 | 2475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:05:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9111046..9111479 | 78..511 | 2170 | 100 | Plus |
2R | 25286936 | 2R | 9110896..9110956 | 17..77 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:05:16 has no hits.
BO30942.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:16 Download gff for
BO30942.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tsu-RA | 96..590 | 17..513 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:19 Download gff for
BO30942.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tsu-RA | 98..592 | 17..513 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:15 Download gff for
BO30942.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tsu-RA | 98..592 | 17..513 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:15 Download gff for
BO30942.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9110896..9110956 | 17..77 | 100 | -> | Plus |
2R | 9111046..9111479 | 78..513 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:19 Download gff for
BO30942.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4998401..4998461 | 17..77 | 100 | -> | Plus |
arm_2R | 4998551..4998984 | 78..513 | 99 | | Plus |
BO30942.pep Sequence
Translation from 16 to 529
> BO30942.pep
MADVLDIDNAEEFEVDEDGDQGIVRLKEKAKHRKGRGFGSDSNTREAIHS
YERVRNEDDDELEPGPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIK
NIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCF
VKGPKRVKKSEKRRRASFLDH
BO30942.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:57:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tsu-PA | 165 | CG8781-PA | 1..165 | 1..165 | 866 | 100 | Plus |