BO30949.complete Sequence
310 bp assembled on 2012-03-19
GenBank Submission: KX796559
> BO30949.complete
GAAGTTATCAGTCGACATGCGTGCCTATTTGCTGCTTGCCCTGTTTGGAT
GTGTGCTTTTGGCCACAGTTTCCGCAAATCCGGTGGACATTGACGACTTG
GAGGACCTCGAGGAGGACAAACGAATTGCTGATGAGCAGGATAATGCTAA
CGATGATGAGAAAGACGATGAGGATTCAAATGAACCCGAGTCCGACGACG
ACTTAGATGAGCCTGAATCCCCGGAGGACGATTCCCAGAACAATGATGAT
TCCGAAAGCGACGAGAGCATCCAGTACAATCAAGATGAAGAGGCAAGCTT
TCTAGACCAT
BO30949.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:05:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18649-RB | 279 | CG18649-PB | 1..276 | 17..292 | 1380 | 100 | Plus |
CG18649-RA | 279 | CG18649-PA | 1..276 | 17..292 | 1380 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:05:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18649-RB | 568 | CG18649-RB | 33..308 | 17..292 | 1380 | 100 | Plus |
CG18649-RA | 489 | CG18649-RA | 33..308 | 17..292 | 1380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:05:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15053828..15054103 | 292..17 | 1380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:05:31 has no hits.
BO30949.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:19 Download gff for
BO30949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18649-RA | 31..306 | 17..294 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:27 Download gff for
BO30949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18649-RA | 33..308 | 17..294 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:20 Download gff for
BO30949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18649-RA | 33..308 | 17..294 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:20 Download gff for
BO30949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15053824..15054103 | 17..294 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:27 Download gff for
BO30949.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15046924..15047203 | 17..294 | 99 | | Minus |
BO30949.pep Sequence
Translation from 16 to 310
> BO30949.pep
MRAYLLLALFGCVLLATVSANPVDIDDLEDLEEDKRIADEQDNANDDEKD
DEDSNEPESDDDLDEPESPEDDSQNNDDSESDESIQYNQDEEASFLDH
BO30949.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18649-PB | 92 | CG18649-PB | 1..92 | 1..92 | 478 | 100 | Plus |
CG18649-PA | 92 | CG18649-PA | 1..92 | 1..92 | 478 | 100 | Plus |
l(2)01289-PG | 1191 | CG9432-PG | 828..899 | 21..92 | 149 | 38.9 | Plus |
l(2)01289-PM | 1193 | CG9432-PM | 828..899 | 21..92 | 149 | 38.9 | Plus |