BO30950.complete Sequence
592 bp assembled on 2012-03-19
GenBank Submission: KX794669
> BO30950.complete
GAAGTTATCAGTCGACATGGTGCAGGTTTGGTATATGGATACGGAGGAAA
CCGATCAGCGCCTGGAGCACCACCGCAATCCGCCTGCCTACTTGGAACTG
GATGATCTGTACCAGAAGACCGGCGTGGAATACTTTAAGATCAATGCGGA
CGAGTACCAGAGCGATAATACCCTCACGGAACTGAGGGCAAAACGTGGCT
ACACCTACGATGATGAGATCACATGCTCGGAAAAGTGCCTTCCAGACTAT
GCCAACAAGTTGAAAGCCTTTTTCACCGAACACCTGCACACGGATGAGGA
AATTCGCCTGATATTGGAGGGATCCGGTTACTTTGATGTTCGCGACAATG
AGGACAACTGGTTGCGCATTAAGGTTGTCAAGGGAGATCTGATCATTATA
CCAGCTGGCATATATCACCGCTTTACTTTGGATACCAATAACTTTATCAG
AACTCGTCGCTATTTTGTGGGCGAACCTGTCTGGGCTCCACACAATCGTC
CTGCTGATGAAATGGACTGTCGCAAATCGTACATCAAGCATCAGTCGGAA
AACTTTGTGCAATTCAATAAGGTTGCAAGCTTTCTAGACCAT
BO30950.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:05:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32068-RB | 561 | CG32068-PB | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:05:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32068-RB | 701 | CG32068-RB | 71..628 | 17..574 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:05:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10664228..10664362 | 440..574 | 675 | 100 | Plus |
3L | 28110227 | 3L | 10663788..10663917 | 216..345 | 650 | 100 | Plus |
3L | 28110227 | 3L | 10663446..10663568 | 17..139 | 615 | 100 | Plus |
3L | 28110227 | 3L | 10664075..10664168 | 346..439 | 470 | 100 | Plus |
3L | 28110227 | 3L | 10663648..10663727 | 138..217 | 400 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 04:05:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 3299..3400 | 514..415 | 136 | 62.1 | Minus |
BO30950.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:20 Download gff for
BO30950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32068-RB | 58..615 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:30 Download gff for
BO30950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32068-RB | 71..628 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:21 Download gff for
BO30950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32068-RB | 71..628 | 17..576 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:21 Download gff for
BO30950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10664228..10664362 | 440..576 | 98 | | Plus |
3L | 10663446..10663568 | 17..139 | 100 | -> | Plus |
3L | 10663650..10663727 | 140..217 | 100 | -> | Plus |
3L | 10663790..10663917 | 218..345 | 100 | -> | Plus |
3L | 10664075..10664168 | 346..439 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:30 Download gff for
BO30950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10656546..10656668 | 17..139 | 100 | -> | Plus |
arm_3L | 10656750..10656827 | 140..217 | 100 | -> | Plus |
arm_3L | 10656890..10657017 | 218..345 | 100 | -> | Plus |
arm_3L | 10657175..10657268 | 346..439 | 100 | -> | Plus |
arm_3L | 10657328..10657462 | 440..576 | 98 | | Plus |
BO30950.pep Sequence
Translation from 16 to 592
> BO30950.pep
MVQVWYMDTEETDQRLEHHRNPPAYLELDDLYQKTGVEYFKINADEYQSD
NTLTELRAKRGYTYDDEITCSEKCLPDYANKLKAFFTEHLHTDEEIRLIL
EGSGYFDVRDNEDNWLRIKVVKGDLIIIPAGIYHRFTLDTNNFIRTRRYF
VGEPVWAPHNRPADEMDCRKSYIKHQSENFVQFNKVASFLDH
BO30950.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32068-PB | 186 | CG32068-PB | 1..186 | 1..186 | 1015 | 100 | Plus |