BO30959.complete Sequence
637 bp assembled on 2012-03-19
GenBank Submission: KX794756
> BO30959.complete
GAAGTTATCAGTCGACATGTCCTTTCTAGCGCAAACTATGCGTCAAATGC
TACGCCACGTGCCCAATCGCAGTTTGTTGACGGCAGGTGCCATGCGTCCA
CTGAGCATATCGCCGGTAATTGGGCAGCAAAACAAGCCGGCGACGGAATC
GGTGGATTTATCGGCCATAGCTAAGGATCAGCAGAAGGAGTGCCTGAGCA
TCTGCGAGCGCATCAACCGGCAGGTGCAAAAATCCGAGCAGGGACGACTC
TTCGCGGTTGTCCACCTGTGCGGCAAGCAATTTAAAGTAACTCCAGGAGA
TATCATCCTGGTGGAGGGATACTGGCCGCCAACGATAGGCGACGAGATCA
GCCTGGATAAGGTGCTCCTGGCCGGTGCCCGCGACTTCACGCTCGTGGGA
AGGCCCATTTTGGAGCCCGGACTCATCTTGGTGAAGGCCACCGTCGTGGA
GAAGACGCTCAGCCACACGAAGACGCACTTTAGGAAGAAGCGCAGGAAGC
AGTACATGCGCATCAACTTCCAGAGATCTCCGCACACCATGGTCCGGATC
AATTCAATTGAACTGGCTCGTCCAGTGGACGGGAATGGCGAGGGGGAGTC
TTCCTCGAGGCGCTTGTTTGCAAGCTTTCTAGACCAT
BO30959.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:05:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL21-RB | 606 | CG9730-PB | 1..603 | 17..619 | 3015 | 100 | Plus |
| mRpL21-RC | 606 | CG9730-PC | 1..603 | 17..619 | 3015 | 100 | Plus |
| mRpL21-RA | 606 | CG9730-PA | 1..603 | 17..619 | 3015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:05:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL21-RB | 866 | CG9730-RB | 83..685 | 17..619 | 3015 | 100 | Plus |
| mRpL21-RC | 1696 | CG9730-RC | 83..685 | 17..619 | 3015 | 100 | Plus |
| mRpL21-RA | 742 | CG9730-RA | 83..685 | 17..619 | 3015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:05:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19254301..19254835 | 619..85 | 2675 | 100 | Minus |
| 3L | 28110227 | 3L | 19254908..19254979 | 88..17 | 360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:05:23 has no hits.
BO30959.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:18 Download gff for
BO30959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL21-RA | 79..681 | 17..621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:22 Download gff for
BO30959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL21-RA | 83..685 | 17..621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:17 Download gff for
BO30959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL21-RA | 83..685 | 17..621 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:17 Download gff for
BO30959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19254299..19254833 | 87..621 | 99 | <- | Minus |
| 3L | 19254910..19254979 | 17..86 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:22 Download gff for
BO30959.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19247399..19247933 | 87..621 | 99 | <- | Minus |
| arm_3L | 19248010..19248079 | 17..86 | 100 | | Minus |
BO30959.pep Sequence
Translation from 16 to 637
> BO30959.pep
MSFLAQTMRQMLRHVPNRSLLTAGAMRPLSISPVIGQQNKPATESVDLSA
IAKDQQKECLSICERINRQVQKSEQGRLFAVVHLCGKQFKVTPGDIILVE
GYWPPTIGDEISLDKVLLAGARDFTLVGRPILEPGLILVKATVVEKTLSH
TKTHFRKKRRKQYMRINFQRSPHTMVRINSIELARPVDGNGEGESSSRRL
FASFLDH
BO30959.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:57:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL21-PB | 201 | CG9730-PB | 1..201 | 1..201 | 1022 | 100 | Plus |
| mRpL21-PC | 201 | CG9730-PC | 1..201 | 1..201 | 1022 | 100 | Plus |
| mRpL21-PA | 201 | CG9730-PA | 1..201 | 1..201 | 1022 | 100 | Plus |
